LOCUS       NM_001108347             727 bp    mRNA    linear   ROD 19-SEP-2024
DEFINITION  Rattus norvegicus similar to human chromosome 1 open reading frame
            53 (C13h1orf53), mRNA.
ACCESSION   NM_001108347 XM_001066661 XM_341128
VERSION     NM_001108347.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 727)
  AUTHORS   Morgenstern,M., Peikert,C.D., Lubbert,P., Suppanz,I., Klemm,C.,
            Alka,O., Steiert,C., Naumenko,N., Schendzielorz,A., Melchionda,L.,
            Muhlhauser,W.W.D., Knapp,B., Busch,J.D., Stiller,S.B.,
            Dannenmaier,S., Lindau,C., Licheva,M., Eickhorst,C., Galbusera,R.,
            Zerbes,R.M., Ryan,M.T., Kraft,C., Kozjak-Pavlovic,V., Drepper,F.,
            Dennerlein,S., Oeljeklaus,S., Pfanner,N., Wiedemann,N. and
            Warscheid,B.
  TITLE     Quantitative high-confidence human mitochondrial proteome and its
            dynamics in cellular context
  JOURNAL   Cell Metab 33 (12), 2464-2483 (2021)
   PUBMED   34800366
REFERENCE   2  (bases 1 to 727)
  AUTHORS   Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
            Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
            Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
            Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
            Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
            Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
            Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
            Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
            Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
            McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
            Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
            Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
            Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
            Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
            Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
            Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
            Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
            Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
  CONSRTM   Mammalian Gene Collection Program Team
  TITLE     Generation and initial analysis of more than 15,000 full-length
            human and mouse cDNA sequences
  JOURNAL   Proc Natl Acad Sci U S A 99 (26), 16899-16903 (2002)
   PUBMED   12477932
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from CH473958.2.
            
            On or before Oct 4, 2007 this sequence version replaced
            XM_341128.2, XM_001066661.1.
            
            ##Evidence-Data-START##
            Transcript exon combination :: BC166874.1, CB569740.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMEA5760400, SAMN12840117
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on single protein-coding transcript
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..727
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /db_xref="taxon:10116"
                     /chromosome="13"
                     /map="13q13"
     gene            1..727
                     /gene="C13h1orf53"
                     /gene_synonym="RGD1566099"
                     /note="similar to human chromosome 1 open reading frame
                     53"
                     /db_xref="GeneID:360851"
                     /db_xref="RGD:1566099"
     exon            1..261
                     /gene="C13h1orf53"
                     /gene_synonym="RGD1566099"
                     /inference="alignment:Splign:2.1.0"
     CDS             25..435
                     /gene="C13h1orf53"
                     /gene_synonym="RGD1566099"
                     /codon_start=1
                     /product="uncharacterized protein C1orf53 homolog"
                     /protein_id="NP_001101817.1"
                     /db_xref="GeneID:360851"
                     /db_xref="RGD:1566099"
                     /translation="MAAQGIRALSRQALGRSPPWAEDFRQQLCSTLHSASEGACGGSA
                     PGSWGTAEEEQRHPVNRELTPAERHIAELHRAACAAGQLSYLDPATGYVVLTRLAHLQ
                     RGACCGSACRHCPYGQVNVKDPSKKKQFNSYFYV"
     exon            262..363
                     /gene="C13h1orf53"
                     /gene_synonym="RGD1566099"
                     /inference="alignment:Splign:2.1.0"
     exon            364..727
                     /gene="C13h1orf53"
                     /gene_synonym="RGD1566099"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 cccgcctcgc accgcgccgg cgccatggcc gcccagggta tccgggcgct gtcgagacaa
       61 gcacttggga ggtcaccgcc ctgggccgaa gacttccgac agcagctctg ctcaaccctc
      121 cattccgctt ccgagggagc ctgcggcggc tccgcgcccg gctcctgggg aacggccgaa
      181 gaagagcaga ggcatccagt gaaccgagag ttaacaccgg cggagaggca catcgccgag
      241 ctgcaccggg ccgcctgcgc ggctggccag ctaagctatt tggatccagc tactggctat
      301 gtggttctca ccaggctggc ccacttgcag agaggtgcct gctgtggttc tgcctgcaga
      361 cactgtccat atggccaagt caatgtgaaa gatccatcta agaaaaagca attcaactcc
      421 tatttttatg tttgacaaca acttcatgtc tattttgtca aattaaactg atgttcttga
      481 aaataaagcc ctggggctgg agagatggct cagcggttaa gagcactgac tgctcttcca
      541 gaggtcctga gttcaattcc cggcaaccac atggtggctc acaaccatct gtaatgggga
      601 ttcgatcccc tcttctggtg tgtctgaaga gagcaacagt ggactcacat acatgaagta
      661 aataaataaa accttttaaa attttggaaa aaaggaagaa ggaaaataaa gccctaatct
      721 agaatta
//
