LOCUS       XM_039100246            1645 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus similar to Fusion (involved in
            t(12;16) in malignant liposarcoma) (RGD1566093), mRNA.
ACCESSION   XM_039100246
VERSION     XM_039100246.1
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051356.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Feb 22, 2024 this sequence was replaced by
            XM_039100246.2.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1645
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="X"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..1645
                     /gene="RGD1566093"
                     /note="similar to Fusion (involved in t(12;16) in
                     malignant liposarcoma); Derived by automated computational
                     analysis using gene prediction method: Gnomon. Supporting
                     evidence includes similarity to: 3 ESTs, 14 Proteins, and
                     100% coverage of the annotated genomic feature by RNAseq
                     alignments"
                     /db_xref="GeneID:501526"
                     /db_xref="RGD:1566093"
     CDS             80..1630
                     /gene="RGD1566093"
                     /codon_start=1
                     /product="RNA-binding protein FUS-like"
                     /protein_id="XP_038956174.1"
                     /db_xref="GeneID:501526"
                     /db_xref="RGD:1566093"
                     /translation="MASNDYTQQATQSYGAYPTQPGQGYSQQSNQPYGQQSYSGYGQS
                     ADTSGYGQSSYGSSYEQTQNTGYGTQSAPQGYGSTGGYGSSQSSQSSYGQQSSYPGYG
                     QQPAPSSTSGSYGGSSQSSSYGQPQSGGYGQQSGYGGQQQSYGQQQSSYNPPQGYGQQ
                     NQYNSRQWRWWRGGGGNYGQDQSSMSGGDGGGGYGNQYQSGGSGGGYGGGQQDRGGHG
                     RGGGGVYNRSSGGYEPRGRGGGRGGRGGMGGSDRGGFNKFGGPRDQGSHHDSEQDNSD
                     NNTIFVQGLGENVTIESVADYFKQIGIIKTNEKTGQPMINLYTDRETGKLKGEATVSF
                     DDPPSAKTAIDWFDGKEFSGNLIKVSFATRRADFNRVNGRGGRGQGGPMGHGGYGGGG
                     SGGGGRGGFPSGGGGGGGQQRAGDWKCPNPTCENMNFSWRSECNQCKAPKPDGPGGGP
                     GGSHMGGNYGDDRHGRGGYDRGSYRGRGGDRGGFRGGRGGGDRGGFGPGKMDSRGEHR
                     QDRRERPI"
ORIGIN      
        1 gttggctcag tcctcgcggc gtcccttcgc agtcgtctgg aatcctgttg cttagcggcc
       61 tgtgcgcgcg tgcgtggaca tggcttcaaa cgactatacc caacaagcaa ctcaaagcta
      121 tggggcctat cctacccagc ctgggcaggg ctattcccaa cagagcaatc agccctatgg
      181 ccagcagagt tacagtggtt atggccaatc agctgacact tcaggatacg gccagagcag
      241 ctatggttct tcttatgaac agacccaaaa cacaggctat ggaactcagt cagctcccca
      301 gggatatggt tccactggtg gctatggcag cagccaaagt tcccagtctt cttatgggca
      361 gcagtcctcc taccccggtt atggccaaca gccagctcct agtagcacct caggaagtta
      421 tggtggcagt tctcagagca gcagctatgg gcagccccag agtggaggct atggtcaaca
      481 gtctggctat ggtggacagc aacaaagcta cggacagcaa caaagctcct ataacccacc
      541 tcagggttat ggacaacaga accagtacaa cagcaggcag tggaggtggt ggaggggtgg
      601 tggaggcaac tatggccaag atcagtcctc tatgagtggc ggcgatggcg gtggtggtta
      661 tggcaatcag taccagagtg gtggcagcgg tggtggctac gggggaggcc agcaggatcg
      721 tgggggccat ggcaggggcg gtggaggtgt ttacaaccga agcagtggtg gctatgaacc
      781 cagaggccgt ggaggtggcc gaggaggcag aggcggcatg ggcggaagtg accgtggtgg
      841 cttcaataaa tttggtggtc ctcgggatca aggatctcat catgattctg aacaggataa
      901 ttcagacaat aataccatct tcgtgcaagg cctaggcgag aatgttacaa ttgaatctgt
      961 ggcggattac ttcaagcaga ttggaattat taagacaaac gagaaaactg gacagcctat
     1021 gattaatttg tatacagaca gggaaactgg caagttgaag ggtgaggcaa cagtctcatt
     1081 tgatgaccca ccttctgcta aaactgcaat cgactggttt gatggaaaag aattctctgg
     1141 gaatcttatt aaagtttcat ttgctacccg gcgtgctgac ttcaaccggg taaatggtcg
     1201 tggaggccga gggcaaggag gacccatggg ccatggaggc tatggaggag gtggcagcgg
     1261 tggtggtggc cggggaggat tccccagtgg aggtggtgga ggtggaggac agcaacgagc
     1321 tggggactgg aagtgtccta atcctacatg tgagaacatg aacttctctt ggagaagtga
     1381 atgcaaccag tgtaaggcac ctaagccaga tggcccagga gggggaccag gaggctctca
     1441 tatgggggga aactacggtg atgatcggca tggcagagga ggatatgatc ggggcagcta
     1501 ccggggccga ggaggggacc gcgggggctt cagagggggc cggggtggtg gggacagagg
     1561 tggttttggc cctggcaaga tggactccag gggtgagcac agacaggatc gcagggagag
     1621 gccaatttag cctggctcct gaagt
//
