LOCUS       XM_039100614             439 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus similar to NHP2-like protein 1 (High
            mobility group-like nuclear protein 2 homolog 1) (Sperm specific
            antigen 1) (RGD1566078), mRNA.
ACCESSION   XM_039100614
VERSION     XM_039100614.1
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051356.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Feb 22, 2024 this sequence was replaced by
            XM_039100614.2.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..439
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="X"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..439
                     /gene="RGD1566078"
                     /note="similar to NHP2-like protein 1 (High mobility
                     group-like nuclear protein 2 homolog 1) (Sperm specific
                     antigen 1); Derived by automated computational analysis
                     using gene prediction method: Gnomon. Supporting evidence
                     includes similarity to: 6 Proteins, and 72% coverage of
                     the annotated genomic feature by RNAseq alignments"
                     /db_xref="GeneID:363514"
                     /db_xref="RGD:1566078"
     CDS             53..439
                     /gene="RGD1566078"
                     /codon_start=1
                     /product="NHP2-like protein 1"
                     /protein_id="XP_038956542.1"
                     /db_xref="GeneID:363514"
                     /db_xref="RGD:1566078"
                     /translation="MTEADVNPKAYPLADAHLTKKLQDLVQQSSNYKQLRKGANEDTK
                     TLNRGVSEFIVMAADAEPLEIILHLPLLCEDKNVPYVFVHSKQALGRARGVSRPVIAC
                     SVTIKEGSQLKQQIQSIQQSIEQLLV"
ORIGIN      
        1 ctgtctgagg tgggctgttg tgaactctcg gtgaggcctg cgcaccgcag ccatgacgga
       61 ggctgatgtg aacccgaagg cctatcccct cgcagatgct cacctcacca agaagttgca
      121 ggaccttgtt cagcagtcaa gtaactacaa gcagcttcgg aaaggagcca atgaagacac
      181 caaaaccctc aacagaggtg tctctgagtt cattgtgatg gcagcagatg ctgagccctt
      241 ggagatcatc ctgcacctcc ctctgctgtg tgaagacaag aatgtcccct acgtatttgt
      301 gcactccaag caggctttag gacgggcccg tggagtctcc aggccggtca tcgcctgttc
      361 tgtaaccatc aaagaaggct ctcaactaaa gcagcagatc cagtccattc agcagtctat
      421 tgaacagctc ctggtgtag
//
