LOCUS       XM_039080351             728 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus similar to tumor protein,
            translationally-controlled 1 (RGD1565798), transcript variant X1,
            mRNA.
ACCESSION   XM_039080351
VERSION     XM_039080351.1
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051342.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..728
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="7"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..728
                     /gene="RGD1565798"
                     /note="similar to tumor protein,
                     translationally-controlled 1; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 12
                     Proteins, and 100% coverage of the annotated genomic
                     feature by RNAseq alignments"
                     /db_xref="GeneID:500923"
                     /db_xref="RGD:1565798"
     CDS             71..589
                     /gene="RGD1565798"
                     /codon_start=1
                     /product="translationally-controlled tumor protein-like
                     isoform X1"
                     /protein_id="XP_038936279.1"
                     /db_xref="GeneID:500923"
                     /db_xref="RGD:1565798"
                     /translation="MIIYRDLISHDELFSNIYKIREIADRPCLEVEGKMVSRTEGAID
                     DSLIGGNAPAEGPEGGRTESTVVTGVDIVLNHHLQETSFTKEAYKKYIKDYMKSLKGK
                     LEEQKPERVKPFMTGAAEKIKRILANFNNYQFFIGENMNPDGMVALLEYPEDGVTPFM
                     IFFKDGLEMEKC"
ORIGIN      
        1 gagcgccact cccgctgcac tgcgttcgct ccgcgctgtc aggctagcgc cactgtctcc
       61 agccgtcacc atgatcatct accgggacct catcagccat gacgagctgt tctccaacat
      121 ctacaagatc cgggagatcg cggacaggcc gtgtctggag gtggagggca agatggtcag
      181 tagaacagag ggtgccatcg atgattcact cattggtgga aatgctcccg ctgaaggtcc
      241 ggagggcggc cgtaccgaaa gcacagtagt caccggtgtt gacattgtcc tgaaccatca
      301 cttacaagaa accagcttca caaaagaggc ctacaaaaag tacatcaaag actacatgaa
      361 atcactcaag ggcaaacttg aagaacagaa accagaaagg gtaaagcctt ttatgactgg
      421 agctgcagag aaaattaagc gcatcctagc taatttcaat aactaccagt tttttatcgg
      481 tgaaaacatg aatccagatg gcatggttgc tctcctggag taccctgaag atggtgtgac
      541 tccattcatg attttcttta aggatggctt agagatggaa aaatgttaac aaattggatc
      601 tatcgcctgc cacccataat tggctgctgc ttaccatcca tacaacacca ggacttagga
      661 caaatgggac tgatgtcatc ttgagctttt attttgaccg tgacttattt ggagtggagg
      721 cccttttt
//
