LOCUS       XM_039113095            1185 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus hypothetical gene supported by
            BC088468; NM_001009712 (RGD1565766), mRNA.
ACCESSION   XM_039113095
VERSION     XM_039113095.1
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051341.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Feb 22, 2024 this sequence was replaced by
            XM_039113095.2.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1185
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="6"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..1185
                     /gene="RGD1565766"
                     /note="hypothetical gene supported by BC088468;
                     NM_001009712; Derived by automated computational analysis
                     using gene prediction method: Gnomon. Supporting evidence
                     includes similarity to: 1 EST, 4 Proteins, and 100%
                     coverage of the annotated genomic feature by RNAseq
                     alignments"
                     /db_xref="GeneID:500622"
                     /db_xref="RGD:1565766"
     CDS             191..931
                     /gene="RGD1565766"
                     /codon_start=1
                     /product="protein YIPF4-like"
                     /protein_id="XP_038969023.1"
                     /db_xref="GeneID:500622"
                     /db_xref="RGD:1565766"
                     /translation="MQPPGPPPAYAPANGDFTFVSSGDAEDLSGSIAAPDVKLDLGVS
                     GDFIKESTATTFLRQRGYGWLLEVEDEDPEDNKPLLEELDIDLKDIYYKIRCVLMPMP
                     SLGFNRQVVRDNPDFWGPLAVVLFFSMISLYGQFRVVSWIITIWIFGSLTIFLLARVL
                     GGEVAYGQVLGVIGYSLLPLIVIAPILLVVGSFEMVSTLIKLFGVFWAAYSAASLLVG
                     EEFKTKKPLLIYPIFLLYIYFLSLYTGV"
ORIGIN      
        1 tgcttgggtg ctcgccaccg gctgggctct ggtgcgacct cgttaggagc tgcagggtgg
       61 actggctcgc gcgtctccac cctcgcccca gcctgcgcct cctggctcgc aggccgcccc
      121 ttagcaggtc gtccccgagg cccgggccca gccgctcccc agcaccttcg cgggctccca
      181 ggccagcgga atgcagcctc cgggcccgcc cccggcctat gcgcctgcca acggggactt
      241 cacctttgtc tcttcggggg acgcagaaga tctcagtggt tctatagcag ctccagatgt
      301 caaattagac ctcggtgtaa gtggagattt catcaaagaa tctacagcaa caacatttct
      361 gagacagaga ggctacggct ggcttttgga agtcgaagat gaggatcctg aagataataa
      421 gccacttttg gaagaattgg acattgacct aaaggatatt tactacaaaa tccgctgtgt
      481 tttgatgcca atgccatcgc ttggttttaa tagacaagtg gtgagagaca atcctgactt
      541 ttggggtcca ctggctgttg ttctgttctt ctccatgata tcattatatg gacagtttag
      601 ggtggtctca tggattataa ccatttggat atttggttca ctgacaattt tcttactggc
      661 tagggttctt ggtggagaag ttgcatatgg ccaagttctt ggagttatag gatattcatt
      721 acttcctctc attgtaatag cccctatact tttagtggtt ggatcttttg aaatggtgtc
      781 tacacttata aaactatttg gcgtgttttg ggctgcctac agtgctgctt cattactcgt
      841 aggtgaagaa ttcaagacca aaaagcctct gctcatttat ccgatctttt tactgtacat
      901 ttattttttg tccttatata ctggggtgtg atccaagttg tacatgaatc aaaaagatgg
      961 tgttacattt gtattaagct gggaattctt gctgaaggga ttggaaaaaa aattactagt
     1021 aaaattttat acattccaga tagagaggca ggcttaaagt ctttttaaac aatatttttt
     1081 tgtatttaag taattgcagt tatctgggat ttttttttgg tcagaattct gaattctgtt
     1141 tggttcttca tattccgcga ataaataaaa agcgttgtgt tttca
//
