LOCUS       XM_039106647            2840 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus similar to Chain A, Solution Structure
            Of Rabbit Apo-S100a11 (19 Models) (RGD1565648), mRNA.
ACCESSION   XM_039106647
VERSION     XM_039106647.1
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051338.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2840
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="3"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..2840
                     /gene="RGD1565648"
                     /note="similar to Chain A, Solution Structure Of Rabbit
                     Apo-S100a11 (19 Models); Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 3
                     Proteins, and 100% coverage of the annotated genomic
                     feature by RNAseq alignments"
                     /db_xref="GeneID:499911"
                     /db_xref="RGD:1565648"
     CDS             989..1285
                     /gene="RGD1565648"
                     /codon_start=1
                     /product="protein S100-A11-like"
                     /protein_id="XP_038962575.1"
                     /db_xref="GeneID:499911"
                     /db_xref="RGD:1565648"
                     /translation="MPTETERCIESLIALFQKYNGKDKNSCQLSKTEFLSFMNTELAT
                     IRKNQKDPSVFDCMMNKLDLNSDGHLDSQEFPNFIGGLAIACHESFLQTSKKNI"
ORIGIN      
        1 ggtctggaat gtgggaagag ggttgtctcc tctgatttct caggagtgtc tgcacttctg
       61 aggatccagc tctctctccc acaggatttg ggtgcaggga gttctttggc cggttcagtt
      121 cagtccttcg ggcataccag aacggcaggt accggggact gactggttcc tgttttcctg
      181 tgtccagaag cactgtgcag tttcccgttg gaccagggat gtgggcagga gtatgcagaa
      241 gtggcagtct gtcctacagt ctcagggtgt ctgacctcag gtttttttat tctatggatt
      301 tttgtggtgt ccttgacccc tcttgagaaa tacaaaatag aaaactagtc cctagaactt
      361 ttgccagtct gatatttaac gtgtcctggg agtgttgtct gatgaccgac tcattgatgg
      421 gtccaggaag caaactctaa tgagaatgat gagtcaggga ctgggttcca tcttttttca
      481 cagccatcag gatgaacagg atcatgaaga ggctcgtttt cacggtgtgc cccgggaacc
      541 tcttttgtga tctagcattc agcctgtaaa gtgggacaat ggatgtcata tcactcctct
      601 gtatctgttt cctgccaacc ttaggatggg caaagggata ctggaaggct gagatgctag
      661 tcaatggggg atttatcaga cgctggtact gatgaaagag aaggaactat cactccagct
      721 ggactggtta acatcagctt ttagcatttc cagagttcag cagtcccaca ggtgatccct
      781 ggatccctgg atggagtctg tcagccaggt gaaagagtgc tgagatgagt gcagactcgc
      841 aacagaaatt gaaattgtct agtagttgag gaaggtaaga aatcccaaca ccaaggggaa
      901 aatcccattt ttaagaataa gcaggggttt tgtcccagtc accatcaacc tcagttgcag
      961 ctgtgccttg ctcctcaact tggcactaat gcctacagag acagagagat gcattgagtc
     1021 cctgattgct cttttccaaa agtacaatgg gaaggataaa aatagctgtc aactctccaa
     1081 aactgagttc ctttccttca tgaacacaga gctggccacc attaggaaga accagaaaga
     1141 ccccagtgtc tttgactgca tgatgaataa gctggacctc aacagtgatg ggcacctaga
     1201 ttcccaagag tttcccaact ttattggtgg cttagctata gcatgccatg agtctttcct
     1261 tcagacttcc aagaagaata tctaaccctg tccattcact tcctgccagc aagtcatcac
     1321 cttctgcacc cccacacccc atccacacct gggctaagcc taccacacat accacacatg
     1381 cagcccacac ctgattggga aaataaaaca atgtcatttt ttaatgtaaa aaaattaagc
     1441 agggatgctg atctggagtc catttaatct gtggtaggca gatccacgtc tgtggtttct
     1501 tgatttcctg aagtttgtgc taacttttgc ttactaaagg ataaacataa tttcttgcca
     1561 ttgtattgaa atccatgttt tagaaacagt aagtaacttg tgtttgttat aaactagaag
     1621 taaactcatg cctctaagac ctagtaaaag atataggctt aaaagccaca gaacatgggt
     1681 tcgatcccca gctccgaaaa aaaagaacca aaaaaaaaaa aaaagccaca gaacattttc
     1741 ttgtcctgac agaaagccac atacgaagct tgaacagaga agtttttagc agaagtagaa
     1801 gcatcttttt gtttgtttat attcaaaaca caaccaaatt gaaatgaaca tcttgagctt
     1861 gtggctgaaa tgaaaactgc cagcgttcca ttatcttatc agaactccat tgttcaatga
     1921 tacttttttt ctttttttct tttttttttt tttggagctg gggaccgaac ccagggcctt
     1981 gcacttgcta ggcaagcgct ctaccactga gttaaatccc caacccattg ttcaatgata
     2041 aaatttggaa tttgaaatag caatagtatg cagtggaaat atgaaccctt tcccattttt
     2101 tatacctttc ttatatctct ataacttcat atgccttaaa ataatgtttt agaacctaaa
     2161 ataattataa ctttcattta ccaactttaa acatctttca tctgaagcat ttttattttt
     2221 aaatcaccga ttcaagttgc tttacatcct ctaattttca ttacttgcat ttatcaatct
     2281 caaacatttt ccataaatgt ttttctaaga cattaagtga gttcaaattt tatatttttt
     2341 cccaccaata atttagtatg aggtgtgggt ggttgggtgg aagaacatcc tcatacaaga
     2401 agcggggggt aggggattta tggatgggaa accgggaaat ggggataaca tttgtactgt
     2461 aaataaaaaa tatccaatga aaagagaaat cagctcacaa gggacccatt cctcagtcaa
     2521 gatggccccg gtttcagagt taaaaatcta ctactattgc cagatgcaga ggaaagtggg
     2581 ccagagaggt ctttccttgg tattcaaggc ttcaatgaaa agtgatttac tttcctgtcc
     2641 acagtcctgc attatatcct ttccgtctta gaatctcaga gtaagcacag cagcatacaa
     2701 gactcaagat tagccacgca tcctccacgg aaacagattc caagaagtgc atgctcacag
     2761 gagcttgata tagctgtctc ctcagaggct ctgccagagt gtgacaaatt cagagggcaa
     2821 tgctagcagc aaaccattaa
//
