LOCUS       XM_008764313            3999 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus RGD1565622 (RGD1565622), mRNA.
ACCESSION   XM_008764313
VERSION     XM_008764313.3
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051340.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Feb 22, 2024 this sequence was replaced by
            XM_008764313.4.
            
            On Jan 21, 2021 this sequence version replaced XM_008764313.2.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3999
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="5"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..3999
                     /gene="RGD1565622"
                     /note="RGD1565622; Derived by automated computational
                     analysis using gene prediction method: Gnomon. Supporting
                     evidence includes similarity to: 2 ESTs, 3 Proteins, and
                     100% coverage of the annotated genomic feature by RNAseq
                     alignments, including 32 samples with support for all
                     annotated introns"
                     /db_xref="GeneID:500582"
                     /db_xref="RGD:1565622"
     CDS             882..2414
                     /gene="RGD1565622"
                     /codon_start=1
                     /product="zinc finger protein 501"
                     /protein_id="XP_008762535.2"
                     /db_xref="GeneID:500582"
                     /db_xref="RGD:1565622"
                     /translation="MDVILETYNNLLSVENNLIRGKQGKILEQDTECNVHEHVTIQEK
                     FCKWDEISKMTLDSTQSTPYKTHLRDPSLRSSNLKRHKAGNTREVHKYKDCVQFLNEC
                     AIIGVNSGIHIENKEHKNTEFDKDFVCKHKVMLKQNINGKNLHQCSECEKCFTKTRKL
                     HLHRRIHTGEKPYKCSECDKCFGCKGSLRIHQRIHTGEKPYKCSECDKCFVQQSHLTV
                     HQRIHTGEKPYKCSECDKCFGQQSHRSIHQRIHTGEKPYKCSQCDKHFIQESCLRRHQ
                     RIHTGEKPYKCSECDKCFTVKLTLRSHMRIHTGEKPYKCSECDKCFGRKGSLRIHQRI
                     HTGEKPYKCSECDKYFGRKGSLRIHQRIHTGEKPYKCSQCDKRFTQESCLRRHQRIHT
                     GDKPYKCCQCDKYFAQEFYLSIHQRVHTGEKPYKCSECEKCFTEKGTLRNHMRIHTGE
                     KPYKCSECDKCFTEKGTLRNHMRIHIGEKPYKFSECDKSFVQQSQLIVHQRSHTGEKP
                     YK"
ORIGIN      
        1 gtgtgtcccg agctcaccag gcagctttct tgcagcagaa aagttggtct tacctgtggt
       61 cctgaggctc aagatcgctc gtggggtgct gcccacgggc tctctgcagc ggcagcaacc
      121 acgaagatat gcgccgctcc ttcccctagt tttatctcat gaaaaattaa aattcttctt
      181 agatgatggt aaaagttgac aacttagtat tttggaaaaa aacaaaacaa aacaaaacca
      241 aaaaaccata tttagcagat agaatctttg tactccaaga caacaggaca cacattgaaa
      301 atagatatcc tgtatctgcc tggtagaatt atcaggaatg ccattaaagt gtcagatatt
      361 gtacttgagt gtgatggcta atgaaatgcc attcaatcta ggtcatcaat cacggtagcc
      421 actagccatt tgtccttgac tctagaccca gggagataag ttttcagtaa taaccctgag
      481 taattgtgtt ttacagcagg tattcatgtg ctctgtattt gttcttggtg cctgctgacg
      541 ttaaagtaga cctcagatta tactcacatt ccctacacat taaatatgtg actctatgct
      601 cacaattctg tagaaatgtt ggcaagattc ctcatatttt gtttttgatg tccttttgtg
      661 tggattagca ttatccataa ctaagttgta ttaatttcat ctttgtagtt ttcaaacctg
      721 gttgtgaaat ttcaagaaca cttccaatat ttgaatctgg gagaagaaca acacaagtag
      781 agggaaacac tctacagggt ttcttaacct tcaaggatgt ggctccagag ttcacactag
      841 aggaattgga aagtctcact tatgctcagc gggcactgta catggatgtg attttggaga
      901 cgtacaacaa tctattgtct gtggaaaata atcttatacg tggaaaacaa gggaagatct
      961 tggaacaaga cacagagtgc aatgtccatg agcatgtgac tatccaagag aagttttgta
     1021 aatgggatga aattagcaaa atgactctag attccaccca aagtacacct tataaaactc
     1081 atctccgaga tccctccctt cggtcctcaa acctgaaaag acataaagct gggaatacga
     1141 gagaagttca caaatataaa gactgtgtac agtttttaaa tgaatgtgct atcattggtg
     1201 taaattctgg aatccacata gagaacaaag aacacaaaaa tacagaattt gataaggatt
     1261 ttgtctgtaa acataaagtg atgctgaaac aaaacattaa tggtaagaac cttcaccagt
     1321 gtagtgaatg tgagaagtgc tttaccaaaa caaggaagct ccatttgcat cggagaattc
     1381 atacaggaga gaaaccttac aaatgtagtg agtgtgacaa atgctttggc tgcaaaggta
     1441 gtctgagaat tcatcagaga attcacacag gagagaaacc ttacaaatgc agtgaatgtg
     1501 acaaatgctt tgtccaacaa tcccatctta ctgttcatca gagaattcac acaggagaga
     1561 aaccttacaa atgcagtgaa tgtgacaaat gctttggcca acaatctcat cgtagtattc
     1621 atcagagaat tcatactgga gagaaacctt acaaatgtag tcaatgtgac aaacatttta
     1681 tccaagaatc ctgtcttagg cgtcatcaga gaattcatac aggagaaaaa ccttacaaat
     1741 gtagtgaatg tgacaaatgc tttactgtta aactcactct gagaagccat atgagaattc
     1801 atacaggaga gaaaccttac aaatgcagtg aatgtgacaa atgctttggc cgcaaaggta
     1861 gtctgagaat tcatcagaga attcacacag gagagaaacc ttacaaatgc agtgaatgtg
     1921 acaaatactt tggccgcaaa ggtagtctga gaattcatca gagaattcac acaggagaga
     1981 aaccttacaa atgtagtcaa tgcgacaaac gttttaccca agaatcttgt cttaggcgtc
     2041 atcagagaat tcatacggga gataaacctt acaaatgttg tcagtgtgac aaatactttg
     2101 cccaagaatt ctatcttagc attcatcaga gagttcatac cggagagaaa ccttacaaat
     2161 gcagtgaatg tgagaaatgc tttactgaaa aaggcactct gagaaaccat atgagaattc
     2221 atacaggaga gaaaccttac aaatgcagtg aatgtgacaa atgctttact gaaaaaggta
     2281 ctctgagaaa ccatatgaga attcatatag gagagaaacc ttacaaattc agtgaatgtg
     2341 acaaatcctt tgtccaacaa tcccaactta ttgttcatca gagaagtcat acaggagaga
     2401 aaccatacaa atgaagtcga tgtgacaaat gttttgccca agaatcctgt cgtaggcgtc
     2461 atcagagaat tcatacagga gataaacctt acaaatgtgg tgaatgtgcc aagttctttg
     2521 ccggagaatc ctatctcatt attcattaga gaattcatac aggagagaaa ccttacaaat
     2581 gtggtgaatg tgagaaatac tttatgtaca aatttaatat tagtatttat cagagaattt
     2641 atactggaga gaagccttac aaatgcagag aatctgcaaa tgctttactg aaacaggtac
     2701 tctgaaaaac cgtatgagaa ttcatacagg aaataaacct taaaaatgca gtgaatgtga
     2761 caaatgattt gactaagaag ttagtccaag aatttatcag agaattcata tagtagagaa
     2821 accttacaaa tgctttggtg aacaatccca tcttagtatt catcagagag ttcatacagg
     2881 agataaacct ttcacatgca gtaattatga aaaatacctt ggccccagag tctgattatt
     2941 catctgagaa ttcatatagg ggaaaaaacc atacaaatgt ggttaatatg acaaatgctt
     3001 tacccaaaaa tccagtcttc atgtacatta gagaattcat agaggagaga aaccttacaa
     3061 aagcagtgaa tgtgacaaat gctttaccca aatgttaggc tagaaaggca tcagagattt
     3121 catacatgag ataatacttg caagtgtgat gtacatgaaa aatgcattaa ctacaatgtc
     3181 tgacagatta catagagaaa aattataaat ttagccaatg ggacaattct ttaccaacaa
     3241 atatcatctt aaaattgatt agataatact taatggagaa aaactttcaa atgtattaga
     3301 ggtatgaacc ttttggccta tctcttagaa ttaagaaaat acatgttaca atctgaagat
     3361 ataacaatgt atttggaaat atctttgact tcatttcagg ttagggaaaa cattttaaat
     3421 ttttttgtgg ggaaagtata tcttgcaaca attgaggttc cacactagcg aatttgtatg
     3481 attatgaaaa cttcagaaac cttcattcaa tgttcaaatc ttagtgaatg tcaactactt
     3541 atgctgagaa aatctctgaa aatatgacag tgtaggaaag ttttcattga actcctacgt
     3601 gtccaccctc aaatattcca agatgaagac atgtggggaa gccagaataa tatagtgttg
     3661 tgtaacactt tcatggcaac agaaattatc tgtttcaaat ggacttcacc cctcaaaata
     3721 tctaataaaa ctggcagcat cctgtatatt caaggaatca aattcagaca aattatactt
     3781 aaaaagtttt atttgacaaa ctgagatacc aaaactgctt gttcttgatc ctataaatat
     3841 gtctacagat gtgaaatctc ctttgacagt ccagtattca taattcttat taaatgctgg
     3901 tttcatgttt gaggataaca actgattatg tgtccttggg ctgtgtggtc aacaactcct
     3961 tccccattgt cctgtaaata aatgtgaata attcaccaa
//
