LOCUS       XM_039097090             588 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus similar to 60S ribosomal protein L18a
            (RGD1565566), mRNA.
ACCESSION   XM_039097090
VERSION     XM_039097090.1
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051336.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Feb 22, 2024 this sequence was replaced by
            XM_039097090.2.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 4% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..588
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="1"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..588
                     /gene="RGD1565566"
                     /note="similar to 60S ribosomal protein L18a; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 1 EST, 1 long SRA read, 6 Proteins, and 95% coverage
                     of the annotated genomic feature by RNAseq alignments"
                     /db_xref="GeneID:499057"
                     /db_xref="RGD:1565566"
     CDS             1..549
                     /gene="RGD1565566"
                     /codon_start=1
                     /product="60S ribosomal protein L18a-like"
                     /protein_id="XP_038953018.1"
                     /db_xref="GeneID:499057"
                     /db_xref="RGD:1565566"
                     /translation="MTLKTTTYVSGTLREYKMVGRCLPTPKCHSPPLYRMRIFAPNHV
                     VAKSGFWHFVSQLKKMKKSSGEIVYCGQVFEKSPLRVKNFGIWLRYDSRSGTHNMYRE
                     YRYLTTAGLVTQCYQDMGARHCARAHSIQIMKVVEIAAGKCRRPAVKQFHDSKIKFPL
                     PHRVLRRQHKPRFTIKRPNTFF"
ORIGIN      
        1 atgacactca aaaccacaac ttatgtgtca ggcacgcttc gggagtacaa gatggtgggg
       61 cgttgcttgc caaccccaaa atgccactca ccgccactgt acagaatgcg aatttttgca
      121 cccaaccatg tggtggccaa gtccggcttc tggcactttg tgtcgcagtt gaagaagatg
      181 aagaagtcat ccggggaaat tgtgtactgt gggcaggtgt ttgagaagtc acccttgcgt
      241 gtgaagaact tcggcatctg gctgcgctat gactcccgca gtggcactca caacatgtac
      301 cgagagtacc ggtacctgac caccgccggc ctggtcacac agtgctacca agacatgggt
      361 gcccgacact gtgcccgtgc gcactccatc cagatcatga aggtggtaga gattgcagct
      421 ggcaagtgcc gccggccagc tgtcaagcag ttccacgact ccaagatcaa attcccattg
      481 ccccaccgtg tgttgcggcg ccagcacaaa ccacgcttca ccatcaagag gccaaacacc
      541 ttcttctaga cacagagacc tactgaataa aagcttcaga ctgtcaaa
//
