LOCUS       XM_039087353             694 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus similar to ubiquitin-like/S30
            ribosomal fusion protein (RGD1565317), mRNA.
ACCESSION   XM_039087353
VERSION     XM_039087353.1
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051345.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Feb 22, 2024 this sequence was replaced by
            XM_039087353.2.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..694
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="10"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..694
                     /gene="RGD1565317"
                     /note="similar to ubiquitin-like/S30 ribosomal fusion
                     protein; Derived by automated computational analysis using
                     gene prediction method: Gnomon. Supporting evidence
                     includes similarity to: 5 Proteins, and 100% coverage of
                     the annotated genomic feature by RNAseq alignments"
                     /db_xref="GeneID:363650"
                     /db_xref="RGD:1565317"
     CDS             90..482
                     /gene="RGD1565317"
                     /codon_start=1
                     /product="ubiquitin-like protein FUBI"
                     /protein_id="XP_038943281.1"
                     /db_xref="GeneID:363650"
                     /db_xref="RGD:1565317"
                     /translation="MQLFVRAQELHTLEVTGQETVAQIKAHVASMEGIAPEDQVVLWQ
                     ARPLEDEATLGQCGAEALTTLEVAGRMLGGKVHGSLARAGKVRGQTPKVAKQEKKTGG
                     AKRRMQSNRRFVNVVPTFGEKKGPNANS"
ORIGIN      
        1 acaaatacat cttaaaaaaa ataaaataaa atctttcttg acgccatctt tgcggttgca
       61 gcagcggcat ctgagggtaa gtagccaaca tgcagctctt tgtccgagcc caggaactac
      121 acaccctcga ggtgaccggc caggagacag tcgcccagat caaagctcat gtggcctcaa
      181 tggaaggcat tgcccctgaa gatcaagtcg tgctctggca ggctcgcccg ctggaggatg
      241 aggccaccct aggccagtgt ggtgcagagg ccctgaccac tctggaggta gccggccgca
      301 tgctgggagg taaagttcat ggttctctgg ctcgtgctgg gaaagtgaga ggtcagactc
      361 ccaaggtggc caaacaggaa aagaagactg gtggggccaa gaggcgaatg cagtccaacc
      421 gacgctttgt caatgtcgtg cccacctttg gcgagaagaa gggccccaat gctaattcct
      481 aagtcctgtt gtgatcctgt cacactaata aagccacttt gctcagaaaa taaataataa
      541 ataaataaat aaataaataa atgataacat cttccatgct ggcacaggac ttgtgactcg
      601 tgagtcctca caggaggact gtgaagtatg aagtgtgtga aactgccaca gatgaggaaa
      661 ctgagcttga aagggttaaa aaaaggtctt tggt
//
