LOCUS       XM_039096480             705 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus similar to ribosomal protein S18
            (RGD1565301), mRNA.
ACCESSION   XM_039096480
VERSION     XM_039096480.1
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051336.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Feb 22, 2024 this sequence was replaced by
            XM_039096480.2.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..705
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="1"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..705
                     /gene="RGD1565301"
                     /note="similar to ribosomal protein S18; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 15 Proteins, and 100% coverage of the annotated
                     genomic feature by RNAseq alignments"
                     /db_xref="GeneID:365357"
                     /db_xref="RGD:1565301"
     CDS             128..529
                     /gene="RGD1565301"
                     /codon_start=1
                     /product="40S ribosomal protein S18-like"
                     /protein_id="XP_038952408.1"
                     /db_xref="GeneID:365357"
                     /db_xref="RGD:1565301"
                     /translation="MSLVISEKFQHILPVLNTNIDGQRKIAFAITAVKGVGRRYAHVV
                     LRKADIDLTKRATQLTEVEAERVITIMQNPRQYKTPDWFLSRQKDVKGGKYSQVLANG
                     LDNKLCEDLELLKEIRAHGGLCLFWGFRVRG"
ORIGIN      
        1 ttcaatgtct tccagggtta tagagtgagt tagaaactag cctgggatac atgaaatccc
       61 gtctcaagat taagaaaagc aaataaactt ccaaggagtc ctacgcaccg ccgcttgtgc
      121 ggccgccatg tctctagtga tctctgagaa gttccagcac attttgccag tactcaacac
      181 caacatcgat gggcagcgga aaatagcttt cgccatcact gccgttaagg gtgtggggcg
      241 gagatatgct catgtggtgt tgaggaaagc agacattgac ctcaccaaga gggctaccca
      301 gctcacggag gttgaggcgg agcgtgtgat caccatcatg cagaacccac gacagtacaa
      361 gaccccagac tggttcttga gcagacagaa ggatgtgaag ggtgggaagt acagccaggt
      421 tctggccaat ggtctagaca acaagctgtg tgaggacctg gagctgctga aggaaattcg
      481 agcccatggt gggctgtgcc tcttctgggg ctttcgtgtc cgcggttagc acaccaagac
      541 cactggccac agcggccgta ctgtgagtgt atccaagaag aaatgactcc ttgggccttt
      601 gctgttaata attagtttat atgcctatga aaaataaaga aaagtaaata aaagcacatt
      661 tgtgctacca tcgctgaaat ttcaggcttc tttttattcc cacat
//
