LOCUS       XM_039097357             720 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus similar to TGF beta-inducible nuclear
            protein 1 (L-name related LNR42) (RGD1565291), mRNA.
ACCESSION   XM_039097357
VERSION     XM_039097357.1
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051353.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Feb 22, 2024 this sequence was replaced by
            XM_039097357.2.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..720
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="18"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..720
                     /gene="RGD1565291"
                     /note="similar to TGF beta-inducible nuclear protein 1
                     (L-name related LNR42); Derived by automated computational
                     analysis using gene prediction method: Gnomon. Supporting
                     evidence includes similarity to: 16 Proteins, and 49%
                     coverage of the annotated genomic feature by RNAseq
                     alignments"
                     /db_xref="GeneID:291419"
                     /db_xref="RGD:1565291"
     CDS             13..720
                     /gene="RGD1565291"
                     /codon_start=1
                     /product="ribosome biogenesis protein NSA2 homolog"
                     /protein_id="XP_038953285.1"
                     /db_xref="GeneID:291419"
                     /db_xref="RGD:1565291"
                     /translation="MNILDCTANDMDIVWTTMKKRERKKVGRPMNVQKKKKKKKKKKK
                     IGLKAKLYHKQCHDEKIQMKKTIKTHEKRNTKQKDAENTPQGAVPAYLLDREGQSRAK
                     VLSNMIKQKWKEKAGKWEVPLPKVRAQGETEVLKVIPTGKRRKKAWKRMVTKVCLVSD
                     GSPKYERFIGPMDLRSKKAHVTPPELKATFCLPILGVRRNPSSPLYTTLGVITKGTVI
                     EVNVKELGLVTQGGKVI"
ORIGIN      
        1 tcaggccaca aaatgaatat attggattgc actgcaaacg atatggatat cgtttggact
       61 accatgaaaa aaagagaaag aaagaaggtt gggaggccca tgaacgttca aaaaaaaaaa
      121 aaaaaaaaaa aaaaaaaaaa aaagattggc ctgaaggcta agctctacca taaacagtgc
      181 catgatgaga aaatacaaat gaaaaagacc attaagacac atgaaaagag aaacaccaag
      241 cagaaggatg ctgagaatac tccacaggga gctgtccctg cctacctgct ggacagagag
      301 gggcagtcaa gagcaaaagt actttccaac atgattaagc agaaatggaa agaaaaggcg
      361 ggaaaatggg aggtccctct acccaaagtt cgtgcccaag gagaaacaga agtattgaaa
      421 gttattccaa caggaaaaag aagaaagaag gcatggaaga gaatggttac aaaagtctgc
      481 cttgttagtg atggttcacc taaatatgaa aggttcattg ggccaatgga tctacgttcc
      541 aaaaaagccc atgtcacacc ccctgagctg aaagctacct tttgcctgcc tatactcggt
      601 gtgagaagga atccctcctc cccattatat acaaccctgg gtgtgatcac caaagggaca
      661 gtcatagaag tgaatgtgaa agaactgggt cttgtgacac aaggaggcaa ggtgatttga
//
