LOCUS       XM_017599965             703 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus similar to 60S ribosomal protein L23a
            (RGD1565170), mRNA.
ACCESSION   XM_017599965
VERSION     XM_017599965.2
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051350.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Jan 21, 2021 this sequence version replaced XM_017599965.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..703
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="15"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..703
                     /gene="RGD1565170"
                     /note="similar to 60S ribosomal protein L23a; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 8 Proteins, and 100% coverage of the annotated genomic
                     feature by RNAseq alignments, including 66 samples with
                     support for all annotated introns"
                     /db_xref="GeneID:498523"
                     /db_xref="RGD:1565170"
     CDS             178..648
                     /gene="RGD1565170"
                     /codon_start=1
                     /product="60S ribosomal protein L23a-like"
                     /protein_id="XP_017455454.1"
                     /db_xref="GeneID:498523"
                     /db_xref="RGD:1565170"
                     /translation="MAPKAKKEAPAPPKAEAKAKALKAKKAVLKGIHSHKKKKIRTSP
                     TFRRPETLRLQRQPKYPRKSAPRRNKLDRYAIIKFPLTTESAMKKIEDNHTLVFTVDV
                     KANKHQVKQAVKKLYDIDVAKVNTLIRPDGEKKAYVHSAPDYEALDVANKIGII"
ORIGIN      
        1 taatataata caagcagctc ctacaggatt ccaaactccc tgtcctgtaa gtgtttgcct
       61 cagagttcta gcctcaggaa gcccttccct tcctgggttt ccaaacccag tacacccatc
      121 ctccgatgag gagaacatac tactgagaat cgtgtcatgt gaaccctttt cgccaagatg
      181 gcgcctaaag cgaagaagga agctcctgcc cctcccaaag ccgaagccaa agcgaaggcc
      241 ttgaaagcta agaaggcagt gctgaaaggc atccacagcc acaaaaagaa gaagatccga
      301 acgtcaccca ctttccggcg gcccgagacc ctgcggctcc agaggcagcc aaaatatcct
      361 cgaaagagtg cacccaggag aaacaagctt gaccgctatg ctatcatcaa attcccactg
      421 accaccgagt cggccatgaa gaaaatagag gacaaccaca cgcttgtgtt cactgtggat
      481 gttaaggcca acaagcacca ggtcaaacag gccgtgaaga aactctatga cattgatgtg
      541 gccaaagtca atactctgat acggcctgac ggagagaaga aggcgtatgt tcactcggct
      601 cctgattatg aggctctaga tgttgccaac aagattggga tcatctaaag tgagtccaga
      661 tggttaattc taaatatata cttttttttc caccataaaa aaa
//
