LOCUS       NM_001105762            1529 bp    mRNA    linear   ROD 03-APR-2024
DEFINITION  Rattus norvegicus similar to human chromosome 16 open reading frame
            89 (C10h16orf89), mRNA.
ACCESSION   NM_001105762 XM_001079046 XM_213215
VERSION     NM_001105762.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 1529)
  AUTHORS   Afink,G.B., Veenboer,G., de Randamie,J., Keijser,R., Meischl,C.,
            Niessen,H. and Ris-Stalpers,C.
  TITLE     Initial characterization of C16orf89, a novel thyroid-specific gene
  JOURNAL   Thyroid 20 (7), 811-821 (2010)
   PUBMED   20578903
REFERENCE   2  (bases 1 to 1529)
  AUTHORS   Gonzales,P.A., Pisitkun,T., Hoffert,J.D., Tchapyjnikov,D.,
            Star,R.A., Kleta,R., Wang,N.S. and Knepper,M.A.
  TITLE     Large-scale proteomics and phosphoproteomics of urinary exosomes
  JOURNAL   J Am Soc Nephrol 20 (2), 363-379 (2009)
   PUBMED   19056867
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from CH474017.1.
            
            On or before Oct 3, 2007 this sequence version replaced
            XM_001079046.1, XM_213215.4.
            
            ##Evidence-Data-START##
            RNAseq introns :: single sample supports all introns SAMEA5760389,
                              SAMEA5760434 [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression,
                                      longest protein
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1529
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /db_xref="taxon:10116"
                     /chromosome="10"
                     /map="10q12"
     gene            1..1529
                     /gene="C10h16orf89"
                     /gene_synonym="RGD1565166"
                     /note="similar to human chromosome 16 open reading frame
                     89"
                     /db_xref="GeneID:287059"
                     /db_xref="RGD:1565166"
     exon            1..232
                     /gene="C10h16orf89"
                     /gene_synonym="RGD1565166"
                     /inference="alignment:Splign:2.1.0"
     CDS             37..1164
                     /gene="C10h16orf89"
                     /gene_synonym="RGD1565166"
                     /note="UPF0764 protein C16orf89 homolog"
                     /codon_start=1
                     /product="UPF0764 protein C16orf89 homolog precursor"
                     /protein_id="NP_001099232.1"
                     /db_xref="GeneID:287059"
                     /db_xref="RGD:1565166"
                     /translation="MARISLLLLLLLSLPQQLSSLPWPDTAQGTMAGLILTALEKATL
                     FLEDRLPKINLDGAVGFQVLEVQLRGVQEKWAHNPLLQPLSLRAGQLANTLFALLQNS
                     IFYLKQSDPTYLREFQPSLQPGFWKLPHAWTRTNASLVYPWLEPLDSFSEESSDACLV
                     QLLGTGTDSRQPCRLSDFCRTLMTKAGCSGYSLSHQLLFFLWARMQGCTEGLFLQSQH
                     YIDIFCANMMDLNRRAEAMGYAYPTQDLFMENIMFCGMAGFSDFYKLHWLEAILNWQN
                     PQVGCFGKPDTKGEPPEVPHRQGVLRRVRRREKLFEDGCSCHNTATAVAALGGFLYIL
                     AEYHPDNGEPTPPTRSPASNYQDGAASPDAQRIGRPLSISS"
     exon            233..382
                     /gene="C10h16orf89"
                     /gene_synonym="RGD1565166"
                     /inference="alignment:Splign:2.1.0"
     exon            383..533
                     /gene="C10h16orf89"
                     /gene_synonym="RGD1565166"
                     /inference="alignment:Splign:2.1.0"
     exon            534..651
                     /gene="C10h16orf89"
                     /gene_synonym="RGD1565166"
                     /inference="alignment:Splign:2.1.0"
     exon            652..787
                     /gene="C10h16orf89"
                     /gene_synonym="RGD1565166"
                     /inference="alignment:Splign:2.1.0"
     exon            788..892
                     /gene="C10h16orf89"
                     /gene_synonym="RGD1565166"
                     /inference="alignment:Splign:2.1.0"
     exon            893..973
                     /gene="C10h16orf89"
                     /gene_synonym="RGD1565166"
                     /inference="alignment:Splign:2.1.0"
     exon            974..1529
                     /gene="C10h16orf89"
                     /gene_synonym="RGD1565166"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 ttgagtgtgt gaccgttcac cgtctgccag cccatcatgg cgaggatcag cctgcttcta
       61 ctcctgctgc tgtccctgcc acagcagctc tcctcactgc catggccaga cactgcacag
      121 ggcaccatgg ccggcttgat cctgactgcg ttagaaaaag ccaccttatt tctggaggac
      181 aggctgccta aaatcaacct ggacggtgca gtggggttcc aagtgctgga agtgcaactc
      241 cgaggagtcc aggaaaaatg ggctcacaac cccttgctgc agccactcag cttgcgtgct
      301 ggacagctag ccaacacact gttcgctctc ctccaaaact ccatcttcta cctcaagcag
      361 agtgacccca catacctaag agagttccaa ccaagccttc agcctggctt ttggaagttg
      421 ccccatgcct ggacacgcac caatgcctcc ctggtctacc cctggctgga gcccctggac
      481 tctttctcgg aggaaagcag cgatgcatgc ctggtacaac tgctaggaac cgggacggac
      541 agcaggcagc cttgcaggct ctccgacttc tgcagaaccc ttatgaccaa ggccggctgc
      601 tcaggctaca gcctctccca tcagctgctc ttcttcctct gggccagaat gcaagggtgc
      661 acggagggac tgttcctcca gagtcagcac tacattgaca tcttctgtgc gaacatgatg
      721 gacctgaacc ggagagctga ggccatggga tacgcctacc ccacccaaga cctcttcatg
      781 gaaaacatta tgttctgtgg tatggctggc ttctctgact tctacaagct gcactggctg
      841 gaggccattc tcaactggca gaaccctcag gtgggatgct tcgggaagcc tgacacaaag
      901 ggtgaacccc ctgaagttcc gcatcggcag ggcgttctga gaagagtgcg aaggcgggaa
      961 aaactgttcg aagatggctg ttcttgccac aacacagcca ctgcagtcgc agccctgggt
     1021 ggctttctct acatcctggc agaataccac ccggacaatg gagagccaac tccacccaca
     1081 cggtcaccag caagcaacta tcaagatggt gctgccagcc ctgatgccca gaggattggc
     1141 aggcccctca gcatctcttc ttaaatgctg gagtcagggg tcacatgcca agggggcatt
     1201 tgaggaaagt gaccatgtat aacccatcac cacttctggg tatttaaaag tcttgagaga
     1261 gcagggccag gagaggcagg gttagagggt ggggtggtcc agatgtcagc agaatacata
     1321 aagcactgtc aattggagct gagccttctg tcttttgtgc atatgttatc agatcattag
     1381 ttgagacaag gtctcactgt gtatccctgg ccggactgga actcacagag accctgcctg
     1441 cttctgcctc caactgctgg gattacaagt gcatgaccag ctgtgtgtca gatcttgatg
     1501 tgtagtctag actgggttca agatcctcc
//
