LOCUS       XM_039100138            5477 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus similar to 60S acidic ribosomal
            protein P1 (RGD1565054), mRNA.
ACCESSION   XM_039100138
VERSION     XM_039100138.1
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051356.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5477
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="X"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..5477
                     /gene="RGD1565054"
                     /note="similar to 60S acidic ribosomal protein P1; Derived
                     by automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 8 Proteins, and 100% coverage of the annotated genomic
                     feature by RNAseq alignments"
                     /db_xref="GeneID:299041"
                     /db_xref="RGD:1565054"
     CDS             5111..5437
                     /gene="RGD1565054"
                     /codon_start=1
                     /product="60S acidic ribosomal protein P1-like"
                     /protein_id="XP_038956066.1"
                     /db_xref="GeneID:299041"
                     /db_xref="RGD:1565054"
                     /translation="MLAVHNMASVSKLTCIYSALILHDNEVTVTEDKINVLIKAAGVN
                     VEPFWPGLFAEALANVNIGSLIYNVGAGGPAPSAAAAPAEEKKVEAKKEESEESEDDM
                     GFCLFD"
ORIGIN      
        1 aattagaaga aactcacata tttcattcaa cctgtgccat gtatcccagt cagtctcatc
       61 acatcatcta cactctaaga cctgtccgtg aagtatctgg acattgtcac ggactaattt
      121 gcacttctgc agttagtctc aggtcatgct atctctctga aaaaggatca ccatggaaaa
      181 gatccctggg ttcccttctc aaaccagcaa agaagctaag tgaccccagg atcatatgaa
      241 tcaaggaaag tcagaaggaa attaggagat agagaatatc atctgaggca agtgggtatt
      301 ttacagaaca ttagttctgt gtcctgtgct gcttagttag ggaatggtag gtttggattg
      361 ccaaggggtg ggtgtatgga gcaaaagcat tgctgaagtc tacctagtct gattgcattc
      421 agtggaaatt cactggcatt aagatatcaa aagtggccca ggcctctgtg ctgttttttg
      481 tgcctcaatc aattgatcat tggtaatttc catcagtaca gattaaaata ttacactgtg
      541 tctgtaacct acatgacttt ttgttttgta acaaggtctc actagccttg gctcttctgg
      601 aactcgctat gtagataagg ctaacctcta ctcagtatgt acctgtggct acccccatag
      661 tgctaagatt aaagacatgc aacaccacac ccagcatcct ataggatttt tttcaactaa
      721 gttgaacagt attccctaca acagaaattc atttggcctg aagtaggatt ctcttactat
      781 ttgtgttgcc cacatgactg gtatattaga ccaccagaca aaataggtgg aaaacatgct
      841 tccattttta gatagacaga tggttgccct ggctgtgctc acttgggaag tctttttcaa
      901 atgaagacat aactgtggaa ggaatctgct aaacacacac gcgcgcgtgc gtgcgcgcgc
      961 acacacacag tttgagaatg tcatacatgt ggcccgtatt ttgatcatat tcacttctag
     1021 ctcatttact ccaactcctc ccagaccaca taactctcac tttagtccac tccacaccgt
     1081 tctgtggttt gagagtcagg gttatgccta catagcaagc tgcctttctt ctgttttcct
     1141 ttagaacaaa agtaaacaga taaggagtca tgctaaatag ggactgctaa ggaaaagctg
     1201 ctaacttccc accgctctcc acaaggaggg gtcttggttc tactgattat ccattcctct
     1261 ggataagtcc taagttttat ctagactaca aaatttctac aagttagatt cagccagaaa
     1321 aatcaagtaa ctcaagggca tcaatttcta gtttaaaatc tcctccatca cctcttcctt
     1381 ctttaagacc ctaaaaggca tatggacaga gcaagtgatt tcatcgatgt tttatgcaca
     1441 agaaatcagg atattgaaaa gagatttgca tatttcactg aacagaatag tgactgcggg
     1501 tcagtgccat gcaggccgca gtagaagaca aagatcattg ctaataattc tttaaacact
     1561 gcatgagtaa tatcattgat acattccaga caccagacaa tttaactacg ttttctcatg
     1621 taagcctcac ataaatctat gagaataaca ttgttataaa tctctgcctt aagataaaaa
     1681 atggaaggga atctcagatc atttaaaaac ccttggctaa attcactcag ccagatcagt
     1741 attctggctg gacttcaaag ctcactattt tttcccaata cactgtaata acgtaatggt
     1801 ttctagcagt gactcctgta ccttgtccca gatcagagag tgctgctgaa acacaccatg
     1861 tgctgtttcc catccccctg agacctaaac tagacataca gttccaggcc tagttcagcg
     1921 taacaggatc tgaatcctct tttggactca gaggattgag gtgaactacc tctcctcact
     1981 cccaccctca cgctttggtc catagtcatt gtacctaatc aggtgggccc aactctcctc
     2041 ctacttgaac ttgctaataa gtaggctgag gaaatatgat agatagaaat gaatcgattg
     2101 atatgagtac cttgatactt ggcaaataat ctttctccca ctcagacctt caccatcagt
     2161 tggagaatat cctcaagaag agttacttaa ttgtaaatca ctttcatagc ctcagcaggg
     2221 acaaagtctc cttctctgag acaattgttc ctagtgtgct ttgggctttc atgccttatg
     2281 ttttgttttt ttgtaaggag gatgtgcagg ctgagctgtc ttgagctcta tgcagaccag
     2341 ccttgccttg aactctatag agatcagcct gcctttgcct cccaactgct gggattaaag
     2401 atgtttagca ccatgcctgt cttgtgtgct tttgagaact ccttcttttg tcccttcagt
     2461 ttctttcttc tatcgccatt tctttctacc tgatgctagt gcagtttcct tttcatcctt
     2521 ctaacccaca aaacagttcg ctgtgccttc ccaaggtctc cctgtagcgc catcattgac
     2581 aggaagtaca tggtttatag aaaacagatt cagattaaaa gagggcaaaa aaaaccagaa
     2641 agaaatgaat atctctgcgt ataaactcgc acactagtag acaagaaata gtcattttta
     2701 tatactttaa agtagcttac ttgtaactcc tcgagctcct tgtttgaata gggaaactga
     2761 aaattccatc ttgcttgtga atgagctttc tgcacatgta agcagtggaa acaaaggaag
     2821 tttatagtgt ccagaaatta agataaaggc tcctaatttc aaatctgata atcttatttt
     2881 ccatgcctac aacagggaag gagaaggatc tagagattta agttctgctt tcctctgcta
     2941 agaattcctc taattcaaac acagaatcag tacaaccccc agccacacac accaccacca
     3001 ccaccaccac caccaccaac accaactcaa acacaagatc agtataaatc tccttccctc
     3061 ctactacctc ctccccaaga tctctttctt ctctcccttt ttccccttta gggttttcag
     3121 gctattgtga aaaggaagat gattttattg ctttcagctt tctttactgc aaagttgtat
     3181 ggctggtgat ttagatcaat agtagagcac acatttagca tgcatgaagc tctaggttca
     3241 tctacatgac ttcttactcc aacataataa aaacaaacaa aaatcctagt aaccagtagt
     3301 ttactaggtg atctctacct gtaacccagc tcttcagagg cagaggcaag gggatcacta
     3361 attcaaggcc agtgtggact gtatagaaag atcctgcttc aaaagacaaa aagcaaatgt
     3421 gaagaccaaa ctaaagaata agaagcctat tgaggacctg tttacttcgg ttgtatctgt
     3481 cctatgcctg ctcacctcca gggacacagg ttactggaga gttttcttct tacagagcta
     3541 gaattgactt agcttagtcc ctggggtcca cataaattct tctgttacca attcgccccc
     3601 ccccatttac aatgtttcaa aatctgaagg caaaggtagt gttctttagt ccaacaaata
     3661 tttagtgtct ctgatgtgcc agatgttgtt ctagactgtg gatgcagtga tgaaaaggaa
     3721 agatatttta tctttccttt tgtgagggca caaaccttcg gcttgtcaga ggaaacaata
     3781 aatgaaacta gatgatgaat agtacagcca aggaaaagac atgatgatca cagttttaaa
     3841 taaaatgatc agcaaagact cactaagtag gtcatagttg agagatgagc taagcgccat
     3901 ggtgagcgct gataatgtat ttgaggaata caaatgggtc cagtgttgct gaagcagagt
     3961 gaataaagga acagtgatgg gggtaaaaaa aattacagat gtaattctag agcttggtaa
     4021 tttaaaaggg agttgtagat tttaaaggct ctggcttttg gactgacatg gaaacattga
     4081 catgaactga ctcatgtcac ttgtcacttg aaatagtctc agattaacac ctttagtttt
     4141 gtcttgttct tctcaggtta ctattataag ataccattaa tcaacttatt tgtaaacaac
     4201 taaaatgtat tctttgcagt tataaaggct ataccatcca agaccatagc accagcagct
     4261 ttggtgtgta cggggggttg actcgctttc ttatgaatgc cacttgcata atgtcctcac
     4321 acagagagca aaggaaagag atcctaccag gcctctttaa aaaagagcta actcaattca
     4381 tgaggacgga atactcaaga ctcaatgaca ttctaatatt tccatctttt aatagtatta
     4441 aacttagggc taggtttcag cccataaatt ttaaggattc gtaaacactg agaccatggc
     4501 aagttctttc catttcccca tgtggtctgg gtcttagctt tgccccatct tagatgctcc
     4561 tagtgtatgt aggtccacaa acacagcatg atatctcagg gactacctaa tgtaaacaga
     4621 ggtgtttaga gccattatgt tcctagatgt ttcgttctta acaccatttc aaagctgact
     4681 ttagttttta gtattgtcag tgcctttatt tgaactttat tgactcacct catatgtggt
     4741 gatactctag tctacaaatg tatgttcaat tgtagacact cttgaacaac tagatttcac
     4801 actaagtcta cactgtgtta gagtaaaagt gaaaatgtga aagtttatgg caataatttt
     4861 agggtggttg atttatatct attatccttc tctacttctg cacttagata tttctccaag
     4921 tagattttta atctttccca agaaatgttg taggtcattc aacagcctcc taatctcagt
     4981 tccaattaaa catttgaagt caagaagttg gttaaagcct ttcctcagct gccgccaagg
     5041 tgctcggtcc ttccgaggaa gttaaggccg cgttggggtg aggccctcac ttcatctggt
     5101 gactagcacc atgctggcag tccacaacat ggcttctgtc tccaagctca cctgcatcta
     5161 ctccgccctc atcctgcatg acaacgaggt gacggtcacg gaggataaga tcaatgtcct
     5221 cattaaagca gctggtgtca atgttgaacc tttctggcct ggcttgtttg cagaggctct
     5281 ggccaatgtc aacattggga gcctcatcta caatgtaggg gctggtgggc cagctccatc
     5341 cgccgctgct gccccagctg aggagaagaa agtagaagca aagaaggaag aatctgagga
     5401 atccgaggat gacatgggat tttgtctttt tgactaaact gcttttgtta acatgtccaa
     5461 taaagagcta aacctgt
//
