LOCUS       XM_039092698             662 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus similar to 60S ribosomal protein L9
            (RGD1565048), mRNA.
ACCESSION   XM_039092698
VERSION     XM_039092698.1
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051349.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Feb 22, 2024 this sequence was replaced by
            XM_039092698.2.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..662
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="14"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..662
                     /gene="RGD1565048"
                     /note="similar to 60S ribosomal protein L9; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 38 Proteins, and 100% coverage of the annotated
                     genomic feature by RNAseq alignments"
                     /db_xref="GeneID:305275"
                     /db_xref="RGD:1565048"
     CDS             30..602
                     /gene="RGD1565048"
                     /codon_start=1
                     /product="60S ribosomal protein L9-like"
                     /protein_id="XP_038948626.1"
                     /db_xref="GeneID:305275"
                     /db_xref="RGD:1565048"
                     /translation="MKTILSNQTVDIPENVHITLKGHTVKGPRGTLRRDFNHINVELS
                     LLGKKKKRLHVDKWWSNRKELVTVRSICSHVQNMIKGETLGFHYKMRSVYAHFPINVV
                     IQENRSLVEIRNFLGEKYIQRVQMRTGVACSVSQAQKDELILEGNDIELVSNSAALIQ
                     QATTVKNKDIRKFLNGIYVSEKGTVQQPDE"
ORIGIN      
        1 tgagtctctt tgtcccatct actgcgagaa tgaagaccat tctcagcaat cagactgtcg
       61 acattcctga aaatgtccac atcactctga aggggcacac agtgaagggc cccaggggaa
      121 ctctgaggag ggacttcaat cacatcaatg tagagctgag tcttcttgga aagaaaaaga
      181 aaaggctcca tgttgacaag tggtggagta acaggaagga actggtcact gtcagaagca
      241 tctgcagtca cgttcagaac atgatcaagg gtgagacact gggcttccat tacaagatga
      301 ggtctgtgta tgctcacttc cctatcaacg tcgttattca ggagaacagg tctctggttg
      361 aaatccgaaa tttcttgggt gaaaaataca tccagagggt tcagatgagg acaggtgttg
      421 cttgttctgt ctctcaagcc cagaaggatg agttaatcct tgaaggaaat gatattgaac
      481 ttgtttcaaa ttcagcggct ctgattcagc aagccacaac agttaaaaac aaggatatca
      541 ggaagttttt gaatggcatc tatgtttctg agaagggaac cgtgcagcag cctgacgaat
      601 gagacctcag tttcctagct tcagaagcaa gatcctgatc acaagtacag tttgggctct
      661 gt
//
