LOCUS       XM_039100394             355 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus similar to transcription elongation
            factor B (SIII), polypeptide 2 (RGD1565032), mRNA.
ACCESSION   XM_039100394
VERSION     XM_039100394.1
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051356.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Feb 22, 2024 this sequence was replaced by
            XM_039100394.2.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..355
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="X"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..355
                     /gene="RGD1565032"
                     /note="similar to transcription elongation factor B
                     (SIII), polypeptide 2; Derived by automated computational
                     analysis using gene prediction method: Gnomon. Supporting
                     evidence includes similarity to: 2 long SRA reads, 3
                     Proteins, and 100% coverage of the annotated genomic
                     feature by RNAseq alignments"
                     /db_xref="GeneID:367701"
                     /db_xref="RGD:1565032"
     CDS             11..340
                     /gene="RGD1565032"
                     /codon_start=1
                     /product="elongin-B-like"
                     /protein_id="XP_038956322.1"
                     /db_xref="GeneID:367701"
                     /db_xref="RGD:1565032"
                     /translation="MIRSHKTTIFTDAKESSTMFELKRIVEGILKRPPEEQRLYKDDQ
                     LLDDGKTLGECGFTSQTARPQATATVGLAFRADDTFEALRIDPFSSPLELPSRCDEAT
                     RLWRQCQ"
ORIGIN      
        1 cgtgtttctc atgatccgga gccacaagac caccatcttt acggacgcca aggagtcgag
       61 caccatgttt gaactgaagc gcatcgttga gggcatcctc aagcggccgc cagaggagca
      121 gcggctgtac aaggacgacc agctcctcga tgatggaaaa actctgggcg aatgtggctt
      181 caccagtcag acagcaaggc cacaggccac agccacagtg ggcctggcct ttcgagcaga
      241 tgacaccttc gaagcgctgc gtattgaccc cttctccagc cctctggagc ttccttccag
      301 gtgtgatgaa gccacaagac tctggaggca gtgccaatga acaagctgtg cagtg
//
