LOCUS       XM_039111030             982 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus similar to calcium binding protein P22
            (RGD1564956), mRNA.
ACCESSION   XM_039111030
VERSION     XM_039111030.1
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051340.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Feb 22, 2024 this sequence was replaced by
            XM_039111030.2.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..982
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="5"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..982
                     /gene="RGD1564956"
                     /note="similar to calcium binding protein P22; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 7 ESTs, 6 Proteins, and 100% coverage of the annotated
                     genomic feature by RNAseq alignments"
                     /db_xref="GeneID:500462"
                     /db_xref="RGD:1564956"
     CDS             57..644
                     /gene="RGD1564956"
                     /codon_start=1
                     /product="calcineurin B homologous protein 1-like"
                     /protein_id="XP_038966958.1"
                     /db_xref="GeneID:500462"
                     /db_xref="RGD:1564956"
                     /translation="MGSRASTLLRDEELEEIKKETGFSHSQITRLYSRFTSLDKGENG
                     TLSREDFQRIPELAINPLGDRIINAFFSEGEDQVNFRGFMRTLAHFRPIEDNEKSKDV
                     NGLEPLNSRSNKLHFAFRLYDLDKDDKISRDELLQVLRMMVGVNISDEQLGSIADRTI
                     QEADQDGDSAISFTEFVKVLEKVDVEQKMSIRFLH"
ORIGIN      
        1 ctcttgccgc cgctgcttct ggcgctgccg ctcccggagg agctcccgtc acggtgatgg
       61 ggtctcgggc ctccacgtta ctgcgggacg aagagctcga ggagatcaag aaggagactg
      121 gcttttccca cagtcagatc acacgcctgt acagccgctt caccagcctg gacaaagggg
      181 agaacggaac tctcagccgg gaagatttcc agaggattcc agaacttgcc atcaacccac
      241 tgggggaccg gatcatcaat gccttcttct cagagggaga ggatcaggta aacttccgag
      301 gattcatgag aactttggct catttccgac ccattgagga taacgaaaag agcaaagatg
      361 tgaatggact ggaacccctc aacagccgga gcaacaaact gcactttgct ttcagacttt
      421 atgacttgga taaagatgac aagatctccc gcgatgagct gttacaggta ctgcgaatga
      481 tggtcggagt gaatatctca gatgagcagc tgggcagtat tgcagacagg accatccagg
      541 aggctgacca agatggagac agtgccatat cttttacaga atttgttaag gttttggaga
      601 aggtggatgt agaacagaag atgagcatcc gatttcttca ctaaagggca gagaccaaat
      661 tattcttgct ttctagtatt taagaactga aacttccttc tgtcctccag ccccacccca
      721 tcctgtcatc cccctttccc agaatactac agctcctgca tgacaacctg aagtctctcc
      781 tgtccataca aacttgcctt tggtgtataa acagggcgtt acagaatggt accctgtcta
      841 tttctgttcg gtatccaccc atcagtcttt attgtaagta ccaacttccc ctgttctact
      901 gctcagtgcc acgcatccgt cctgtctgag gaaagaaaca gggactcatg tcaagaacca
      961 gccagcaaag ctcccactag at
//
