LOCUS       XM_008773327            1371 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus similar to Xlr-like (RGD1564845),
            transcript variant X1, mRNA.
ACCESSION   XM_008773327
VERSION     XM_008773327.3
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051356.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Feb 22, 2024 this sequence was replaced by
            XM_008773327.4.
            
            On Jan 21, 2021 this sequence version replaced XM_008773327.2.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1371
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="X"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..1371
                     /gene="RGD1564845"
                     /note="similar to Xlr-like; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 1 EST,
                     1 long SRA read, 6 Proteins, and 99% coverage of the
                     annotated genomic feature by RNAseq alignments, including
                     3 samples with support for all annotated introns"
                     /db_xref="GeneID:363507"
                     /db_xref="RGD:1564845"
     CDS             189..1064
                     /gene="RGD1564845"
                     /codon_start=1
                     /product="X-linked lymphocyte-regulated protein PM1
                     isoform X1"
                     /protein_id="XP_008771549.1"
                     /db_xref="GeneID:363507"
                     /db_xref="RGD:1564845"
                     /translation="MTVPMDESLILFDFDDEEDDTNVLEKALSEEKSVACDKDENKSP
                     PIEADEDMGDEIHSMLHKFGENVSFSVKRQNFQGSLETPMEICYLSSDEEKDGSTSEK
                     EVFEERTPLTQDDGNANPEEIVGDTQSQIQNILGKFEGDINKTLHVKRKHMETYIKDS
                     FKRSNQKLEQVWKMNKRERKKINSKFCKQYITTFQKFDMDVQKFNEEQEKSANNYQKQ
                     QKAFKLSKSSQNQSLQAVREVHEKFMKGLMDLETNNHDMLFGIDGELRKEMSMFKKNL
                     MKQTLKFSSAFETSD"
ORIGIN      
        1 caagtgatcc tcagagacct caggcctgtg cttcctggga gtgtttttgt tttttttgtt
       61 ttgttttgtt ttgttttttt cagttgagga gctgagtgcg ggagggtgca gctgtgacgg
      121 tgttcacccc tcagttggcc gaaaacctct gagtgcttac caaaagaaga aggaatctta
      181 gggaagtcat gacagtacca atggacgagt ccttaatact ttttgacttt gatgatgaag
      241 aagatgatac aaatgttttg gagaaggctc tttctgaaga aaagagcgta gcatgtgaca
      301 aggatgagaa taagtcacct cctatagaag cagacgaaga tatgggggat gaaatacaca
      361 gtatgttgca taaatttgga gaaaacgtaa gtttctcagt gaaaaggcag aattttcaag
      421 gttctctaga gacaccaatg gagatctgct acctatcaag tgatgaagag aaagacggga
      481 gtacttcaga aaaggaggtt tttgaagaaa ggactccatt aactcaagat gatgggaatg
      541 caaatcctga agaaatagtt ggagatacac aatctcaaat acaaaatatt cttggaaaat
      601 ttgaaggtga cattaacaag actcttcatg taaagagaaa acacatggaa acttatatca
      661 aagattcttt caaacgcagt aaccaaaaat tagaacaagt ttggaaaatg aacaaacggg
      721 aaaggaagaa gatcaacagc aaattttgta agcagtatat aactacattt cagaagttcg
      781 atatggatgt acagaaattc aatgaagaac aagaaaaatc agctaataat tatcaaaaac
      841 aacaaaaagc atttaaactg tcaaaaagta gccagaacca gtccctgcaa gcagttagag
      901 aagtgcatga gaaattcatg aagggtttga tggacttgga gaccaacaac catgatatgc
      961 tttttggtat agacggcgaa ctgagaaaag aaatgtctat gtttaaaaaa aacctcatga
     1021 agcagactct gaagttctct tctgcttttg aaacttctga ctaatgaaag cttgtatatt
     1081 ttcactcgct gcttcatttg taactaaaat ttttgttaac tttgtctcct tccctggaac
     1141 atcagcaggg agtgattgca aatgtttgaa agactcttta atccttgtta ctctgatgat
     1201 tctgaaaagg aagctgaacc tgagtgatgg ggatgtaatt acagggttag ctgggaggta
     1261 aacctttaga atcaaaatag aaaggtcctt ttgaacatct tcagtcattt tcttgtttaa
     1321 gtgtaagagc ctctttatat taacttccaa ataaaatcta aatgactact a
//
