LOCUS       XM_039091202             642 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus similar to ribosomal protein L31
            (RGD1564839), mRNA.
ACCESSION   XM_039091202
VERSION     XM_039091202.1
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051348.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Feb 22, 2024 this sequence was replaced by
            XM_039091202.2.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..642
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="13"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..642
                     /gene="RGD1564839"
                     /note="similar to ribosomal protein L31; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 20 Proteins, and 100% coverage of the annotated
                     genomic feature by RNAseq alignments"
                     /db_xref="GeneID:289401"
                     /db_xref="RGD:1564839"
     CDS             219..593
                     /gene="RGD1564839"
                     /codon_start=1
                     /product="60S ribosomal protein L31-like"
                     /protein_id="XP_038947130.1"
                     /db_xref="GeneID:289401"
                     /db_xref="RGD:1564839"
                     /translation="MAPAKKGGKKKGRSAINEVVTREYTINIHKRIHGVGFKKRAPWA
                     LKEIRKFAMKELGTPDVRTDTRLNKAIWAKGIRNVPYRIRVCLSRKHNEDEDSPNKLY
                     TLVTYVPVTTFKNLQTVNVDEN"
ORIGIN      
        1 cccacttgta atcattctca tttttcctaa catacttcct tcctacttag ccttaaacaa
       61 acattaatct cgctgtctcc tattttgaac atctcataca aatgtgaaca caatatttga
      121 ttgttagatt tctctaactt agcggtttta agacttattc ccggactttc catcccacaa
      181 tccctcgcgc ccttcctttc caacttgggg cgggcagtat ggctcccgca aagaagggtg
      241 gcaagaagaa gggccgttct gccatcaacg aggtggtgac ccgagaatac accatcaaca
      301 ttcacaagcg catccatgga gtgggcttca agaagcgtgc tccttgggca ctcaaggaaa
      361 ttcggaaatt tgccatgaag gagttgggga ctccagatgt gcgcacagac accaggctca
      421 ataaagccat ctgggccaaa ggaataagga atgttccgta ccgcatccga gtatgtttgt
      481 ctagaaagca taatgaggat gaggattcac caaacaaact ctacacactg gtaacttacg
      541 tgcctgttac cacattcaaa aatctacaga cggtcaatgt ggatgagaac taactgctga
      601 atgtcaaata aagttacaga actgccaaaa aaaaaaaaaa aa
//
