LOCUS       XM_228930                475 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus similar to HMGA1b (RGD1564836), mRNA.
ACCESSION   XM_228930
VERSION     XM_228930.4
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051356.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Feb 22, 2024 this sequence was replaced by
            XM_228930.5.
            
            On Jan 21, 2021 this sequence version replaced XM_228930.3.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..475
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="X"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..475
                     /gene="RGD1564836"
                     /note="similar to HMGA1b; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 26
                     Proteins, and 100% coverage of the annotated genomic
                     feature by RNAseq alignments"
                     /db_xref="GeneID:302676"
                     /db_xref="RGD:1564836"
     CDS             99..374
                     /gene="RGD1564836"
                     /codon_start=1
                     /product="high mobility group protein HMG-I/HMG-Y-like"
                     /protein_id="XP_228930.1"
                     /db_xref="GeneID:302676"
                     /db_xref="RGD:1564836"
                     /translation="MSELVLKSSQPLSSKQEKDGTEKQGQGRPSKEPSEVPTPKRPRD
                     RLKGSKNKGAAKTQKVTTTQERKPRGRPKKLEEEEEGISQESSEEEQ"
ORIGIN      
        1 ctctaattgg gactccgaat cgcggctatg tctggtgttg gcgtggctcc aaggaggccc
       61 agactcactc tgtgctgccc cacacataga gaagcagaat gagcgagttg gtcctaaagt
      121 ccagccagcc cctgtcctcc aagcaggaaa aggatgggac tgagaagcaa ggccagggca
      181 ggccttcgaa ggagcccagt gaagtgccaa ctccgaagag acctcgggac cgactaaagg
      241 gaagcaagaa taagggggca gccaagacgc agaaagttac cacaactcag gagaggaaac
      301 caaggggcag acccaagaaa ctggaggagg aagaggaggg catctcccag gagtcctcgg
      361 aggaggagca gtgacccctt gcagtggcac ctgctccttg gccattgagg agcagccttc
      421 ctctgggact ggaagccctg ctcccaaggc cccacctcgc ccccactgca tgcta
//
