LOCUS       XM_006253873            2056 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus similar to OTTMUSP00000000636
            (RGD1564786), transcript variant X1, mRNA.
ACCESSION   XM_006253873
VERSION     XM_006253873.4
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051352.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Feb 22, 2024 this sequence was replaced by
            XM_006253873.5.
            
            On Jan 21, 2021 this sequence version replaced XM_006253873.3.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2056
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="17"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..2056
                     /gene="RGD1564786"
                     /note="similar to OTTMUSP00000000636; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 1 EST,
                     17 Proteins, and 100% coverage of the annotated genomic
                     feature by RNAseq alignments, including 1 sample with
                     support for all annotated introns"
                     /db_xref="GeneID:306889"
                     /db_xref="RGD:1564786"
     CDS             670..1932
                     /gene="RGD1564786"
                     /codon_start=1
                     /product="serpin B6-like isoform X1"
                     /protein_id="XP_006253935.2"
                     /db_xref="GeneID:306889"
                     /db_xref="RGD:1564786"
                     /translation="MPYLPFFTKSEHDNVGEIEDSAYTFDCVFMMFIVILHSRLTIMD
                     PLLKANGNFAIKLFKVLGEDISKNVFFSLPSISSALSMILMGANGTTASQICQAMSLD
                     KCNSIGGGDVHQHFLSLLTKVNKTDTRCMLRKANSVFIEDSFEILASFKDACHKLYEA
                     EIEELDFKGAPEQSRQHINTWVAKKTEDIIRELLPPCTVNSNTCLFLVNVIYFKGSLE
                     KPFNKADTREMPFKVSMNEKKTVQMMSQKSTFKMTYVKDISTQVLTLPFENSILSMYF
                     FVPDSHVAQRKLENELTYDKFLEWTDEDTMEEKEMEVFLPRIKLEESYDMNGVLRKLG
                     MTDAFEEDKADFSGISSKHGLFLSKVVHKSFVEMSEEGTEAAAPTDVVTMKSPLTPRC
                     LIADHPFLFSIQDTRSKEILFLGRFSSP"
ORIGIN      
        1 aggcagctgt tttcttccag gcaacatcag gtgttggtcc ctgtcagttt ctttgaggta
       61 agttctcctt gttgctgcta ccttttccag ggtatgggct catccatgag cctccagaga
      121 ctctcctgcc tccacctcca ggacctccct tggtatatca acaatgtgcc actttgtcag
      181 ttcttatatg ccttatatgt acatggctgt tactctatcc tttgaggtat ttatgaaggc
      241 cagcagctgt ctttttgttc attggttttt tattccacct cctttgtcca tgactgggat
      301 cactactatg tacctctttc ttgagcttta ctgtttctga gggtcaaagc caagatattc
      361 acacttgagt gacatacaca ttacccactg agccattcct caaccaaaca cttgtatttt
      421 taaccagcag caatacgtaa tctcttctgc aagtagtcaa attttgtact tccttaatgc
      481 catcctgaca gaaaccagga gatcttagac aatatgctat tggagtaaaa aattgaccat
      541 gcatataagg tccttatttt cattggctta ttttctttaa gacagcatct tactatgtag
      601 cttatgtgag gccggatttg ctatatatat ataaggatat acactttgtg catgtgatct
      661 ttactttcca tgccatatct acccttcttc accaagtcag agcatgacaa tgttggtgag
      721 attgaagatt cggcctatac atttgactgt gtttttatga tgtttattgt aatccttcat
      781 tctagactca ccattatgga tcctctcctg aaagcaaatg gtaactttgc cataaagctt
      841 tttaaagtat tgggtgaaga catctcaaaa aatgtatttt tctcactccc gagcatatct
      901 tcagctctgt ctatgatctt aatgggagca aatggaacca ctgcaagcca gatatgtcag
      961 gcaatgtctt tggataaatg taacagcatt ggtggaggtg atgtccatca gcacttcctg
     1021 tcacttctta ccaaagtgaa caagactgac acaaggtgca tgctcagaaa agccaacagt
     1081 gtcttcatag aagacagttt tgaaatccta gcatctttta aagatgcctg ccataagttg
     1141 tacgaggcag agatagaaga gctggacttc aagggtgctc cagagcagtc ccgacagcac
     1201 atcaacacct gggtagccaa aaagacagaa gatataatca gagagttact gcctccctgt
     1261 acagtaaatt caaacacttg cctcttcctt gtgaatgtca tctacttcaa aggaagcttg
     1321 gagaagccat ttaacaaagc tgacacaagg gagatgcctt tcaaagtcag catgaatgag
     1381 aagaaaactg tgcaaatgat gtctcagaaa tctacattta agatgactta tgtgaaggat
     1441 atatcaacac aggttctgac tcttcccttt gaaaacagta tcctctccat gtacttcttt
     1501 gttccagaca gccatgttgc tcagagaaag ttggaaaatg aactgactta tgataaattc
     1561 ttggagtgga cagacgagga cacgatggaa gaaaaagaga tggaggtttt cctcccacgg
     1621 atcaaactgg aggagagcta tgacatgaat ggtgtccttc gcaagctggg catgactgat
     1681 gcctttgagg aggataaagc agatttttct ggaatttctt ctaagcatgg cttgtttctg
     1741 tccaaggttg tgcataaatc ctttgtggag atgagtgagg agggcacaga ggctgcagct
     1801 cccactgacg tggtaacaat gaaatcacca ctgactccta gatgcttgat tgcagaccat
     1861 cccttccttt tctccattca agatactaga agcaaagaga ttctgttcct tggccggttc
     1921 tcctctccct gaagaatggg tgttcctgtc agtcttttaa cgactctccg tgttttacct
     1981 gtgaatcaag tgaccttatt cataagtaca atgacaatta tgaaataaat gcctttatgg
     2041 cacctcactt tctgaa
//
