LOCUS       XM_039087145            2628 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus similar to ribosomal protein S10
            (RGD1564698), mRNA.
ACCESSION   XM_039087145
VERSION     XM_039087145.1
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051345.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Feb 22, 2024 this sequence was replaced by
            XM_039087145.2.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2628
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="10"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..2628
                     /gene="RGD1564698"
                     /note="similar to ribosomal protein S10; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 1 EST, 15 Proteins, and 100% coverage of the annotated
                     genomic feature by RNAseq alignments"
                     /db_xref="GeneID:497882"
                     /db_xref="RGD:1564698"
     CDS             2090..2587
                     /gene="RGD1564698"
                     /codon_start=1
                     /product="40S ribosomal protein S10-like"
                     /protein_id="XP_038943073.1"
                     /db_xref="GeneID:497882"
                     /db_xref="RGD:1564698"
                     /translation="MLMPKKNRIAIYELLFKEGVMVAKKDVHMPKHPELADKNVPNLH
                     VMKAVQSLKSRGYVKEQFAWRHFYWYLTNEGIQYLRDYLHLPPEIVPATLRRSRPETG
                     RPRPKGPEGERPARFTRGEADRDTYRRSVVPPGADKKAEAGAGSATEFQFRGGFGHGR
                     GQPPQ"
ORIGIN      
        1 actgagccac ctctccagct ccttgttacg tcttataatc attgatttgc tcaagtagta
       61 acttggatga cagattagtt cattgcagca tttacttttt aaaaggacaa actgtagcca
      121 tctggtttac catcacatca acacatactc agcactcaaa agtaattgtg aaaaagaaaa
      181 atcagagaaa ttgtctttgt cggggttact atggctgtca tgaaacacca tgaccaaagc
      241 aacttggaga gggaagggtt tcttaggctt atacttcttt gacacctttc atcactgaag
      301 aaaatcagaa cagtaactca aacagagtag gaactcggag gcaggaactg aggcagaggc
      361 catggtgggt actgcttact ggcttccatg tcatggcttg cccagcctac ttttgtttag
      421 aaccacctgt ccagggttgg ccccacccat gatggactgg gccctccccc atcaatcact
      481 aattttgaaa atgccctaca ggttacctaa gtctgatctt atgaaagcac tttctcaatt
      541 gaggctccct cctcttggat gactctaact tgtgtcaagt tgacatgaaa ccagctagca
      601 caggaatacg atggaaaggt gatgtaaagg aaagagagga ggtgacgaga aagaaagaac
      661 aataggggca gaagagacaa aggcagggtg ggaggagacc ctggtactgg gggcccagtg
      721 atgtcagaat tttatctgag gcatggatat gaaaatatgg agaagtcttt accattgctc
      781 aagacgttga ccacccccag taacaaagtc ctttgcccag aaaaatctgt tcttttctct
      841 cactctaact ggttctctga ggaggaaatt cagcagctcc atttagtgat catgtactag
      901 catccactga caagccattc tgtgttgtac agagatcaaa gccaggaaac taatctctgt
      961 gtttttctca caggcctttg agctaggcac aatgatgtac taaccatggt ttgttagctg
     1021 gcaatttatt ggcctgaccc attttctctg tgttcacctc acgctctaga tgaggaataa
     1081 ggaagaagat gcttagtggg ccaccatcag gacatacttc tttgacggtg ttgccactca
     1141 tggcccagct agttactggc tttctcagaa acctaactct gaagggaagg aaagatacca
     1201 tctgatatta gttctacctc ccagtcccaa aactcaactc actgattatg tggacctctc
     1261 tgggtagctg acgaatattg aaaacccatt cttcaggtat catgctttct ctccagaccc
     1321 ttcttgagga gggtcctcca gcacctcata gatcagagct atcacaggag gtgcagagag
     1381 aagaggccca cagagatgtg gtgaggtcat tttgcatgga cctggttcag cctcactttc
     1441 gggaggcttc ttgttacaat gcacatcaag cacactctag gcagatgtcc ccctcagaca
     1501 cggagaacat tactaaggat gtgaaaacat tcccagcgtg gcttgctgca gcactttatg
     1561 ggatgtgaga atgccatttg taattgttag gaatttggaa aggcttttca gaatggaagc
     1621 tgccagtgtc tccggggatt ctcggagctg ttcatatagc aacatttgca ctagtcattc
     1681 cagatgtgag cgcctttcct ggtctatata agtgagaggg gttgagggta tttcacagag
     1741 agaaaacgat ctgtaaagag tgagaggcag agggacggac ctccccctca gtccctccct
     1801 gtcatcatag aaaacagtat cttctctcat cgctaacacc ctggcactta cggtagggcg
     1861 agcccctcag ccagatcgtg agccctttgc agcggggagt cctgtttatg tctgactcct
     1921 ctttgtatca ctacatcacc aaacatcttg tgctagagac attagaagcg gttttgtttt
     1981 agctctttgg tcattggtgc attccatatg ttaaaaagat ggcatatttg ggaacttaaa
     2041 actccagggt agctttccag cctccgcctc ggaccctgca gccgccgcaa tgttgatgcc
     2101 caagaagaac cggattgcca tctatgaact cctttttaag gaaggggtga tggttgccaa
     2161 aaaagacgtc cacatgccca aacaccccga gctggcagac aagaacgtgc ccaaccttca
     2221 cgtcatgaag gccgtgcagt ctctcaagtc tcgaggctac gtgaaggagc agtttgcttg
     2281 gagacatttc tactggtacc tcacgaatga gggcatccag tacctccgag attacctgca
     2341 cctacctccg gagatcgtgc cggccaccct gcgccgcagc cgtcctgaga ctggcaggcc
     2401 taggcccaaa ggtccagagg gtgagcggcc tgcaagattc acaagagggg aggcagacag
     2461 agacacctac agaaggagcg ttgtgccccc tggagctgac aagaaagctg aggctggggc
     2521 tggctcagca acggagttcc agtttagagg aggtttcggt catggacgtg gtcagccgcc
     2581 tcagtgaagt tggagattat gttgtgttga ataaacttta aagaaaaa
//
