LOCUS       XM_002728684            2896 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus similar to oocyte specific homeobox 3
            (RGD1564651), mRNA.
ACCESSION   XM_002728684
VERSION     XM_002728684.4
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051336.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Feb 22, 2024 this sequence was replaced by
            XM_002728684.5.
            
            On Jan 21, 2021 this sequence version replaced XM_002728684.3.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2896
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="1"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..2896
                     /gene="RGD1564651"
                     /note="similar to oocyte specific homeobox 3; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 2 ESTs, 6 Proteins, and 100% coverage of the annotated
                     genomic feature by RNAseq alignments, including 3 samples
                     with support for all annotated introns"
                     /db_xref="GeneID:292572"
                     /db_xref="RGD:1564651"
     CDS             1355..2449
                     /gene="RGD1564651"
                     /codon_start=1
                     /product="sperm motility kinase X-like"
                     /protein_id="XP_002728730.1"
                     /db_xref="GeneID:292572"
                     /db_xref="RGD:1564651"
                     /translation="MMPSDFSQISGTWNSEIFTSSHATEDLMKQQDLKACYLIEENFN
                     TNYKMLNTLGKGNFSVVKRAFHVPTCTTVAVKILQNNKYTSVTSREARIMKSLSHPNI
                     IKLYHVVETRETTYLVMEYASEGELQDRIIQAGSLEDSEARKIFVQIVHAVQYCHDHH
                     IAHRDIKASNILINHKGNIKLGDFGLATKVVPGQKLAGFCGTLPYCAPELLQAEKYEG
                     LPVDIWSLGVLLFLMVSGSLPFRGNSFVEIKWQIISANFRVPPHVSIDIFNVIVEMLM
                     INPSRRPTIHQIKTRPMIRDSEACLPPNSTQVFPDTRSPSTVRSTRAVTDKPDRNISS
                     CSSQEEFKSVTLTGSSSGDTLEKETVRNTL"
ORIGIN      
        1 tcgggctaca gactgtaagt cattatgaat tctctcaata tagaaaacgt gtgagtcctg
       61 tgtctgctcc gacacagggc tcggccactt gtggaagcag gacgtgggaa gtttgactgt
      121 gcttgtccca agccaatcct gggcaggaat tgggctggag gacaaggctc aggggtggga
      181 aagcacagtc tgaggcttgg ggcagctggc gctggctcag ggtccctgtg actgcaaaga
      241 ggcaagggcc ttggagttcc caggccaggt tcccaggttc ttggacactc aggtacctct
      301 ggaagtcaca gaagagctga gaatctggaa tctgggccca cggtctggat ctagccccgg
      361 gtcagtgaag agagggtgga gaggggcggg gctctgactg atccggtggg gagagtagca
      421 gacttggttt ggtggcaatt gtggttggga gtgtagatag gccttctatg ggaggttaga
      481 cagtgactct gtaggcaaag gccatctcaa aaggttcccc acggcaaacc ccatgagaag
      541 aggcagtcca tggttttgag gtatttattg tcatgggaga aagtggatga gtaaaactat
      601 accctactcc tcagggtggg cctgaaatta aataccttct gcacggaaga atgcctgaga
      661 aggaaagctt attcgttaac tcctctaggc ctctgggtac ttcattagaa tggagatctg
      721 tcttcagcct aagtgaccag agttcatgcc tttttttttt cctattggtc tgagttatta
      781 gggcgactgt ggaggggttt ggggcgttgc ccttacttga ctgcccttac ttgactgatg
      841 gacacaaatc tatggtgggg gtgagagggg aggctgcagc cagtgacagg ggcttggtgc
      901 ccagaagcag gtgaagctcc tactgttcct tcagggtttc tggggtttct aaccttagcc
      961 cagctgagga ctaggctacc tttcatggtc cacttcttca ccgttgggta tctaggggct
     1021 gctagctggg tgtaactagc ttccttaggt ctccactgcc ccactgacca gcctttcctg
     1081 tcttgaggat agaatgtgaa ggcatcagtg ggttgtgccc tgccatcatc gctccatttc
     1141 agctctgacc tcaaagagaa ccattgtgag gtcattgccc acttacagct ctggccgagg
     1201 ctgcctctgt cctcacagtg agtgcagttg ctgttggctg gttggagagc atttgggttt
     1261 ctaggctggt gagccactgc gctcggatct ttgtgagttg ttgaatctga acacagtttg
     1321 aagctgtagg ctggttggaa agcaactgga gtcaatgatg ccgagcgatt ttagtcagat
     1381 ttcgggaact tggaattctg aaatatttac ttctagccat gccacggagg acctaatgaa
     1441 gcagcaggat ctgaaggcct gctatttgat tgaggagaac ttcaacacga actataagat
     1501 gctgaacact ctgggcaaag gaaacttttc agtggtgaaa cgagccttcc atgtccccac
     1561 atgcaccact gtggctgtaa aaattctgca aaacaacaag tatacctcag tcacctccag
     1621 ggaagccagg attatgaaat cccttagcca tcctaacatc atcaagctgt atcatgtggt
     1681 cgagacaaga gagaccacct acctggtgat ggagtatgcc tcagagggag agctgcaaga
     1741 ccgcatcatc caagcggggt ctttagagga tagcgaggct cgaaagatat ttgtccagat
     1801 agtacatgct gtgcagtact gccatgacca tcacattgcc catagagaca taaaggccag
     1861 caacattttg atcaaccaca aggggaacat caagctgggt gattttggcc tggctactaa
     1921 agtggttcct gggcagaagc tggccggttt ctgtggcaca ctgccctact gtgccccaga
     1981 actcttgcaa gcagagaaat atgagggtct tcccgtggat atctggagtt taggggtcct
     2041 cctcttcctc atggtgtcag ggagcctgcc tttccgaggc aattcttttg tggagataaa
     2101 gtggcagatc atctctgcaa acttccgcgt tcctcctcat gtttccattg atattttcaa
     2161 cgtcatcgtt gaaatgttga tgatcaatcc cagcaggagg cccactatcc accaaatcaa
     2221 gacgcgtccc atgatcaggg acagtgaggc atgtttacca cctaattcca cacaggtttt
     2281 cccagacact cggagcccta gcactgtcag gagcacgaga gctgtcacag ataagcctga
     2341 caggaatata tcctcctgca gttcccagga ggagtttaag agtgtaaccc tcacaggctc
     2401 ctcctctggg gataccttgg agaaagagac tgtaaggaat acactgtaaa ataaacattt
     2461 aagaaacacc ctgcataagg gaccgctgta cgtgtgtgtg tgtgtgtgta tgaacctgat
     2521 aaggatacac cctaatgaag caatgtatat gccccaaata tggttggcta aaagtagctt
     2581 aaaaagctgg tctggccact gcaagagaat cacttttgga gtccaccaga gataatgtca
     2641 ctgagacaag actcattcct ggagtcactg agatctgagc ccaccgaccc agatgcccag
     2701 aagcccgatg ccaattgaga caagcccaca cagcaagccg agcttcagca agcagaagga
     2761 cacgtctaga accttatttg acacactgat attggacatg actaagggcc agaccagagg
     2821 ttagtggggc atgagtgttg cgtgaatgcg atcctatgtt gccatggtaa ataaagaact
     2881 atatcctcta atctta
//
