LOCUS       XM_008758860             454 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus similar to large subunit ribosomal
            protein L36a (RGD1564617), mRNA.
ACCESSION   XM_008758860
VERSION     XM_008758860.3
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051336.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Feb 22, 2024 this sequence was replaced by
            XM_008758860.4.
            
            On Jan 21, 2021 this sequence version replaced XM_008758860.2.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 2% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..454
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="1"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..454
                     /gene="RGD1564617"
                     /note="similar to large subunit ribosomal protein L36a;
                     Derived by automated computational analysis using gene
                     prediction method: Gnomon. Supporting evidence includes
                     similarity to: 14 Proteins, and 88% coverage of the
                     annotated genomic feature by RNAseq alignments"
                     /db_xref="GeneID:308353"
                     /db_xref="RGD:1564617"
     CDS             137..454
                     /gene="RGD1564617"
                     /codon_start=1
                     /product="60S ribosomal protein L36a-like"
                     /protein_id="XP_008757082.1"
                     /db_xref="GeneID:308353"
                     /db_xref="RGD:1564617"
                     /translation="MVNVPKTRQTFCKKCGKHQPHKVTQYKNGKDSLYAQGKQRYDRK
                     QSGHGGQTKTIFCKKAKTTEKIVLRLECVKPNCRSKRMLPIKRCKPFELGGDKKRKDP
                     VLS"
ORIGIN      
        1 cacacacaaa cacacacaca tgcacgcacg cacgcactca tgcacacacg cgcgtgcaga
       61 catggtttgg agggaagagt cacacaatta tctttgttga taaaagaatg gctctacttt
      121 ctgagctctt gcaaacatgg tgaacgttcc taagacccgc cagacattct gcaagaaatg
      181 tgggaagcac caaccccata aggtgacgca atacaagaat ggcaaggatt ctttgtatgc
      241 ccagggaaag cagcgttatg acaggaaaca gagtggccac ggcgggcaga ctaagaccat
      301 tttctgcaaa aaggctaaaa ctacagagaa gattgtgctg agactggagt gcgttaagcc
      361 caactgcaga tctaagagga tgctgcctat taagagatgc aagccttttg aactgggagg
      421 tgacaagaag agaaaggatc cagttctaag ctga
//
