LOCUS       XM_039103498             571 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus similar to 60S ribosomal protein L23a
            (RGD1564606), mRNA.
ACCESSION   XM_039103498
VERSION     XM_039103498.1
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051337.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Feb 22, 2024 this sequence was replaced by
            XM_039103498.2.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..571
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="2"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..571
                     /gene="RGD1564606"
                     /note="similar to 60S ribosomal protein L23a; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 6 ESTs, 16 long SRA reads, 23 Proteins, and 100%
                     coverage of the annotated genomic feature by RNAseq
                     alignments"
                     /db_xref="GeneID:499523"
                     /db_xref="RGD:1564606"
     CDS             16..531
                     /gene="RGD1564606"
                     /codon_start=1
                     /product="60S ribosomal protein L23a-like"
                     /protein_id="XP_038959426.1"
                     /db_xref="GeneID:499523"
                     /db_xref="RGD:1564606"
                     /translation="MLGIFQLWRLKQDGHLKPKAKKEAPAPPKAEAKAKALKAKKAVL
                     KGVHSHKKKKIRTSPTFRRPKTLRLRRQPKYPRKSAPRRNKLDHYAIIKFPLTTESAM
                     KKIEDNNTLVFIVDVKANKHQIKQAVKKLYDIDVAKVNTLIRPDGEKKAYVRLAPDYD
                     ALDVANKIGII"
ORIGIN      
        1 gcatggtagt ggtgcatgct tggaattttt caactctgga ggctgaaaca agatggtcac
       61 ttgaaaccga aagcgaagaa ggaagctcct gcccctccca aagccgaagc caaagcgaag
      121 gccttgaaag ctaagaaggc agtgctgaaa ggtgtccaca gtcacaaaaa gaagaagatc
      181 cgaacgtcac ccactttccg gcggcccaag accctgcggc tccggaggca gccaaaatat
      241 cctcgaaaga gtgcacccag gagaaacaag cttgaccact atgccatcat caaattccca
      301 ctgacgaccg agtcggctat gaagaaaata gaggacaaca acacgcttgt gttcattgtg
      361 gatgttaagg ccaacaagca ccagatcaaa caggccgtga aaaaactcta tgacatagat
      421 gtggccaaag tcaatactct gatacggcct gacggagaga agaaggcata tgttcgcttg
      481 gctcctgatt atgatgctct agatgttgcc aacaagattg ggatcatcta aagtgagtcc
      541 agatggttaa ttctaaatat atactttttt t
//
