LOCUS       XM_039082885             713 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus similar to 40S ribosomal protein S25
            (RGD1564597), mRNA.
ACCESSION   XM_039082885
VERSION     XM_039082885.1
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051343.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 42% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..713
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="8"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..713
                     /gene="RGD1564597"
                     /note="similar to 40S ribosomal protein S25; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 4 Proteins, and 57% coverage of the annotated genomic
                     feature by RNAseq alignments"
                     /db_xref="GeneID:501042"
                     /db_xref="RGD:1564597"
     CDS             1..657
                     /gene="RGD1564597"
                     /codon_start=1
                     /product="40S ribosomal protein S25-like"
                     /protein_id="XP_038938813.1"
                     /db_xref="GeneID:501042"
                     /db_xref="RGD:1564597"
                     /translation="MLLNNGLLERPRPEQLTSVETEETVVEKQLKQCDQGNSVNAGIA
                     DVCPLIGCPEKAMASLLKRFLLQMDNLKLTMKKQQKNPNLECDCSGPHHSLSFKDDKK
                     KDAGKSAKKDKDLLNKSGGKAKKKKWSKCKVRDKLNNLVLFDKATYDKLCKEVPNYKL
                     ITPAVVSERLKIRGSLARAALQELLSKGLIELVSKHSAQVIYTRNTKGGDAPAAGEDA
                     "
ORIGIN      
        1 atgctgttaa acaatggtct gctagagagg ccccgcccag agcagctgac ctctgtggaa
       61 actgaggaga cagtggtgga gaaacaactt aagcagtgtg atcaaggcaa cagtgtgaac
      121 gctggaatag ctgatgtgtg ccctttaatt ggatgtcctg agaaagctat ggcatcactt
      181 ctgaagcgtt tcttgctgca aatggacaat ctgaagctaa ccatgaagaa gcagcagaag
      241 aatccaaacc tagagtgtga ctgcagtggt ccacaccact ctctgagctt caaggacgac
      301 aagaagaagg atgcgggaaa gtcggccaaa aaagacaaag acctactaaa taaatctggt
      361 ggcaaggcca aaaagaagaa gtggtccaaa tgcaaagttc gggacaagct gaacaatctc
      421 gtcctgtttg acaaagctac ttacgacaaa ctttgtaagg aagttcccaa ctataagctt
      481 attactccag ctgtggtctc cgagagactg aagattcgag gttccttggc cagggcagcc
      541 cttcaggagc tacttagtaa aggacttatc gagctggttt caaagcacag tgcccaagta
      601 atttacacca gaaacacaaa gggtggagac gccccagctg ctggtgaaga tgcataaaca
      661 gattcaatca gctgtacatt tgggaaaata aaacattatt gaatcaaaaa aaa
//
