LOCUS       XM_346041               1106 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus similar to Zgc:56193 (RGD1564447),
            mRNA.
ACCESSION   XM_346041
VERSION     XM_346041.7
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051344.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Feb 22, 2024 this sequence was replaced by
            XM_346041.8.
            
            On Jan 21, 2021 this sequence version replaced XM_346041.6.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1106
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="9"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..1106
                     /gene="RGD1564447"
                     /note="similar to Zgc:56193; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 16
                     Proteins, and 99% coverage of the annotated genomic
                     feature by RNAseq alignments"
                     /db_xref="GeneID:367254"
                     /db_xref="RGD:1564447"
     CDS             350..760
                     /gene="RGD1564447"
                     /codon_start=1
                     /product="histone H3.3A-like"
                     /protein_id="XP_346042.2"
                     /db_xref="GeneID:367254"
                     /db_xref="RGD:1564447"
                     /translation="MPHTKQSVRKSTGGKAPRKQLATKAAPKSALSTGGVKKPHRYRP
                     GTGALGETRCYQKFTELLICELPFQRLVREIAQDFKTDLRFQSAATDVLQEASEAYLV
                     GHSEDTNLCVIHAKHVTIMSKDIQLAHHIRGEHA"
ORIGIN      
        1 tccctttatg atttttgttt tctattttaa acagtacttt ctctacaaca gaagaatctg
       61 aaaaagacac ctgcagcctt ctcggtgaat atttgagaat tgttgctaac atagggttat
      121 gtcctccttc atctttgttg catattttat ccaaagtata agtctcagct aaaaagaaaa
      181 cagaattcta caaagtatga aatcaaaggt accatcattt caaattttac ctcagggtgt
      241 tcgcagcctt tgccacgccg ccgccgccgc actccaacgc cagcgctgcc tatcgcttgc
      301 tgagctccag ctgaaggaga aggggggtaa ataaggaggt gcccacgcca tgcctcatac
      361 aaagcagtct gtccgcaaat ccaccggtgg taaagcaccc aggaaacaac tggctacaaa
      421 agccgctccc aagagtgcgc tctctactgg aggggtgaag aaacctcatc gttacaggcc
      481 tggtaccggg gcactcggtg aaaccagatg ctatcagaag ttcactgaac ttctgatttg
      541 cgagctcccc tttcagcgtc tggtgcgaga aattgctcag gacttcaaaa cagacctgcg
      601 cttccagagt gcagctactg atgttttgca ggaggcaagt gaggcctatc tggttggcca
      661 ttctgaagat accaacctgt gtgttatcca tgccaaacat gtaacaatta tgtcaaaaga
      721 tatccagcta gcacaccaca tacgtggaga acatgcttaa gagtccacta tgaggggaaa
      781 cattccattt tcaaaaaaga attttttcct cttcttcctc ttatcagtag ttctgaatgt
      841 tagatatttt ttccatggtg tcaaaggtac ctaagtctat gcttgcgagt ggaaacatag
      901 gggacagaac cagctattgg cagtttctcc acgttcattc gtgtgtgaat ttttaatata
      961 aatgcaagat gcaaagcatt aatgcaagca aaatgtttca gtgaacacag ttcaacagtt
     1021 gaactttata acaattttaa ataaacctgt taaaaatttc tggacaacgc cagcatttgg
     1081 agttttttaa aataagtaaa attctt
//
