LOCUS       XM_039080450            6669 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus similar to hypothetical protein
            4930509O22 (RGD1564409), transcript variant X1, mRNA.
ACCESSION   XM_039080450
VERSION     XM_039080450.1
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051342.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6669
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="7"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..6669
                     /gene="RGD1564409"
                     /note="similar to hypothetical protein 4930509O22; Derived
                     by automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 4 ESTs, 1 Protein, and 100% coverage of the annotated
                     genomic feature by RNAseq alignments, including 5 samples
                     with support for all annotated introns"
                     /db_xref="GeneID:314670"
                     /db_xref="RGD:1564409"
     CDS             188..1669
                     /gene="RGD1564409"
                     /codon_start=1
                     /product="putative sperm motility kinase W isoform X1"
                     /protein_id="XP_038936378.1"
                     /db_xref="GeneID:314670"
                     /db_xref="RGD:1564409"
                     /translation="MDITSIKKTLGSQYRVVFFLGQGSYGRVRLAWHRRTQALVAIKT
                     VEISKDTIRGILSEMTTLESLNHPNIISLYEVLITGTGVHFILQYAPGGNLGKLISEE
                     GPLPEEKAKKMFGQVVSAIRYCHSLDIVHRDIKPQNILIDGEGNIKLIDFGQAIKCKP
                     GTLLSRHCGTRDFNAPELVLREPYDGKSSDVWSLGVVLYFFTTGYLPFRGKTINDVEE
                     RITTGTYTIPTHLSGQLENLIHQILRVSPGMRPSVEEIENHPWIKKCEFKILPKTDPD
                     YKIIEMLCAMGYKAKDILESLQKKRYDEPMGAYLSLKDHVSKGFDVGYITLAKPGDPC
                     PPPPPSPAHPSVFGLPLRRRASEPIFGLHHRPPSREQNPLDLILSGLKMSRCVSMPPI
                     AVYYPKKERSTSTRALHSTPVACPCVSNNMSEVEIILPPKQDIEMNTSSPPQRMGWFK
                     RLRKGIRDCFSRLCCLPRAPKKKTQHRSSKRVAPLKKAASSTI"
ORIGIN      
        1 tcacaaagat ccactgtgat gtaagaatga gtgtcctctg tataagacag tggaccagcc
       61 tgttgaattt gtccataagg accagggagc aggttaacgt tgacctgtgg gactccttga
      121 tagctttgta ttttgttagt tgacggggtt attgtacctc acaacttgtg ttcaccagat
      181 cacagggatg gacatcactt ctattaagaa gactttgggc agtcagtata gggtggtttt
      241 ctttcttgga cagggttcat atggcagggt gagattggcc tggcaccgga gaacgcaggc
      301 cctggttgcc atcaaaacgg tagagatcag caaggacacc atcaggggga tcctgtctga
      361 aatgaccaca ttggagtcat tgaaccatcc gaatataatt tctttatatg aggtcctgat
      421 cacagggacc ggagttcatt ttatattaca atatgctcca ggaggcaact taggaaaact
      481 aataagtgag gagggcccat tgccagaaga aaaggcgaag aaaatgttcg gacaggtcgt
      541 atctgccata agatattgcc atagcctgga tattgtccat cgcgacatca agccacagaa
      601 tatactgata gatggagagg gcaatattaa gctgatcgac tttggccagg ccatcaaatg
      661 caaacctggt acattactga gtaggcactg tggaaccagg gactttaatg ccccagaact
      721 ggtattaagg gagccatatg atggcaagag ttctgatgtg tggagtttgg gggtggtgct
      781 ctatttcttt accactggct acttaccctt cagaggaaag accatcaatg atgttgagga
      841 aaggattaca acggggacct ataccattcc tactcacctg tctgggcaac tcgaaaacct
      901 gatacatcaa attctgagag tttccccagg tatgaggccc tctgtagagg aaattgaaaa
      961 tcacccatgg atcaagaaat gtgagtttaa aatcctgccc aagactgacc cagattacaa
     1021 aattatagaa atgctctgtg caatggggta taaagccaag gacatcttgg aatccctcca
     1081 aaagaaaaga tacgatgaac caatgggggc atatttgagc ttaaaagatc atgtaagcaa
     1141 agggtttgat gttggatata tcactctagc caagcctggg gatccatgcc ctccgccacc
     1201 cccatcacca gcacatccct ctgtctttgg ccttcctctc aggagaaggg ccagtgagcc
     1261 catctttggc ctccaccaca gacctccctc aagagaacag aatcctcttg acctgattct
     1321 atcaggactc aagatgagca ggtgtgtctc catgcctccc attgcggtat actatcctaa
     1381 gaaggagaga agcacttcta cccgtgccct ccactcaaca cctgtggctt gcccgtgcgt
     1441 cagcaacaac atgtcggaag ttgaaataat cctgccacct aagcaagaca ttgagatgaa
     1501 tacgtcatct ccccctcaga ggatgggatg gtttaagaga ctccgcaaag gaatcaggga
     1561 ctgtttttca agactttgct gcctcccaag ggctccaaag aaaaaaaccc agcatagatc
     1621 ctccaagaga gtggcccccc tgaaaaaggc agcaagcagt accatataaa agcttccctc
     1681 ctgcagataa tggtgcattt gaggccagga cagtcatgga ctcctgagta caaggaaagt
     1741 ggctcattgt tgctaaggat cccaactcaa attagcaaca ctggactgaa aacacaaact
     1801 aaaatcctcc tacctgagca aggtatgcag aaaaaatgag agactgctgt tctcagggac
     1861 aagtatccat atggaatcta tagtgatgat ctatgcctgg cagaggaaca atggtcaact
     1921 atctaatggg ccccctcaaa gtctccctgc agctcagaag aacaccaagg gcctcagctc
     1981 tgtcattcct gtatcactgt ggagcatctg ccaagaatgg acaccagcat cagtagacca
     2041 gggagagact ggttcccaca ctttagttcc gcacgcccaa acagtaaaac aacatcctat
     2101 cccctaatga ggtatgtaca taatgacaga ggattctcca cacaaacttg attcacaaga
     2161 acagggcctc tttggtagac acccaaacca tctgaaatca ggcaagaaga cgtgagcagt
     2221 agccttcgat ccctgtacct caagaccaaa taacactcat tctgatagga tacatgagct
     2281 ggtcctcgtt tatcttcatt ccccaattcc ttctatctcc tatccgcatg aagacctttc
     2341 cttcccatgc tctgatctga atcttgttcc gcaattcatg gaacacattt gaaaagtcga
     2401 tctggacctc catgtcctca tttgtccgta tggaccttca ggatggacag tctctggaag
     2461 atcctgtgac agctgcagga tgggctgagc agctgtgttt gtccatatct acggcagaag
     2521 cacttgagcc aatagactac ctaacagtgc cattctgccc ttaacaataa tgtgaggatt
     2581 cccctgtctc catatgaacc aacctgcctg ccccaacact gtgctaatgt cgctgcggga
     2641 acactaagga catgaggact atgagagtag gatgctcggt gcaaaaaaat gagttccctt
     2701 ttaatactga ctaagatgct caggcctcaa aggaggtgga ctgcaagggt gagagctgag
     2761 tgttccttct ggatatgagt caacaccagc acgcaggaat ccaccaggtt tggatggacg
     2821 atgcatctga ccagaagagg ggagtagtaa gtttctgggg tacactgaaa gatccctcac
     2881 tctgtgtaat tacccaggaa atgaaatagt cttgtccatg tggacattgg tgcccaaatg
     2941 agaaaaatag tgtatatatc ctgaccactt aaaagtcatg ctttttctga gagaacctct
     3001 gagctcgaaa gactgtgaaa taggatgtct gcctgtacca gaatctttcc agtgtagaga
     3061 atttcatcag gaaggaagag gcccagagca tgcacatatg ttgaactctt gaagggcacc
     3121 cagtttgaaa gagaacatca aaggcctgaa tcagtgtgaa acatgctgtc tgcaagtact
     3181 agaacacttc ctgagagcaa gggacactgc caaaccacta gaggccaaaa gttatgatgg
     3241 ataaagagac aggtgttctg gtgacctgta accccatcag gagccccaag ggtcacctcc
     3301 tgctaaacca aacataacct ttatcagtga aggtcactcc cgagaaaccc tgttgagaaa
     3361 ccctgcagac aggaaagcca aggaggcctc ctccttccca ttgtcattat tttctaaggg
     3421 agcttgaaca ggttagctcc tacagacttc ttaaactgcc tggaacactc tgctaattct
     3481 gtgttcccac actcttcaac tgagtcaaga gaagaaaaca gatatttgga actctgatcc
     3541 aatcaaatta atattctggt gatcagaagc caagactgta cagagatttc tgaggcctct
     3601 ccaggaattc tgtccagaat cacgctctgg aggacttcag tgtgcgagaa tgtgagtacg
     3661 ttggatggac tctggggtct aaggaatgaa gtttgtcctc attaggacaa aaagatacaa
     3721 ggggaacgcc ggagtacata tagaacacag ggtgccatga tgtggagccc gaagacaagg
     3781 gaggctgctg aacactctaa tgactgtatg agtgaacttg gacatgaaca gtgtagctgg
     3841 atctgtttgc cttcagttca agctgcaatg ttgtcaccat ctcctcttta agcccatgta
     3901 tccttgacaa ggttgttctg cccttcaagc tcatatgatg gttgtgcatg taggagacct
     3961 agccttctgt caccaaggaa acagaaagca gaggaggaat gtgaccgtgg gaggctgcag
     4021 gcaaaagtga tgtggggcca caactgtacc tggaagctac atggtacaat ccctgaggcc
     4081 ctgttcagac cttcattcta ttctggtgtc ttcctagtga cagccctgct agccaatgac
     4141 aacaacttct ccctgatctt ccccagcctt gcttcccagt cctgagactt gaagagcaca
     4201 gaggagggcc tctgtaggtc agtcactggc tctggaccat tgaccactac cactgctttt
     4261 acttgggatg gtgttcaaat tgtgggatgt ctgagaaagc tgggttccac gtttttgcta
     4321 tgcaacctgt tcctcacgtc ctggactttg ccggctccag tcctcagttg ccattcagta
     4381 agcattgtga cgtgtcaggc tctcaggaga agccagatcc cagtggcatt agtgtgacaa
     4441 acaagctgtg cccaaggagc tgacactctg gcagagtcca ggacatccag gaagacagag
     4501 gtggtgagga aagtctgcat caaaacagat atcaccaact atgactctga catccaatga
     4561 agcagttgag ggccatgatg cttttctgac tgaggcaaca cagcctggag ctcaaatccc
     4621 gaggctgtgc accaaagtcc ttccctgttt gtcactggtt gctattgatt taaaaatcta
     4681 gttcaatatg ggaaaaaata cacttttcaa tctcctggaa cattctgtct cagagaggac
     4741 catgtctaca cgtcaaagga aagaccagat cctggtgctt tcccacaaga agttgctcaa
     4801 tgtggctacc aggcaggcca aacataagcc tgtgtctgca gacaggaggg caccaacaat
     4861 gtgtcaagca acctcatctg catcgtcaca agcatctgca gtgtggatat ctggtcaaca
     4921 tggtcgtttg acagttgtgg agcccctccc accaataaag gtgaagaacc tgaaggatct
     4981 gaagctgtgc cagtacatgc tggagaaata cttgactgga ctcgggagta ggagcctagg
     5041 cattggccca cagatgtgct gttctccttc tatggatacc tgtcgcaaca acacaatctt
     5101 ctctgtctac tggagttgtc ttggttgtag atttggagat cctcaatgtc ccagcttagt
     5161 tctctaatgt taagtcatat cgactcttag catagtactt tatttgccac tgttctttct
     5221 acctttattt tgccagaatt ttctatgggt aagttattcc atctataaca ctttatgatg
     5281 tgtaagccca cacgagggta tccagagccc atacacaatg tgctcttatt tacctgtgag
     5341 aagtccaagc cagtaacccc aatcttaact cagtggtgag aaggaactta aaactcagaa
     5401 caggacttgt tttcattcct ttcttgttag tatcattcac aacttctgta gaagttggga
     5461 gtccagaaag caaagggcag gattttctca catgatcttg acccatgttg ggttttctgt
     5521 cttccatctc cacctttaac attaaatata ccacatctct ccaaaggtca tgcctattct
     5581 agtgtgctgc actcagtgac gaagttggac caagcgtcaa aagagtgaag gccaagctct
     5641 gactgtgaca gagagtttga gatagacaac tgatgcttgg aaaaacactt gacttctcgc
     5701 tgggacttcc atctattgta aataaccaac aacctgttca aggatcaatg tgcctctgag
     5761 atgaggacaa caaggtagaa gggagtccac agaaggaaac gggtctgagg gctaacacca
     5821 taacgcttcc aattctgtct tctaggcatc actaacaaat ctatatagtc ctacctccca
     5881 gaagatgagt gaaggtgtta cagttaggat gactgttgac atgaggctct cagaggttct
     5941 ccacaaatct gaaggacaaa attgagattg ccattcatat ggtctttcca tagtctcccc
     6001 ttgcaatcag aatggaccat cactatggac ctcatctatt agatgcaggg ctgctgctga
     6061 cacactggat agagcacaca caagctccct gtctgactcc ctcagctctt gcatgtctcc
     6121 ttggctatca tttcagagct tctgattctt cagacatcag cttcttgata ctgaagagat
     6181 tgttctactt gatgagccca ggcctagaag atggacagca tccaagaagc ctggcccatc
     6241 taaggccaag tcacatcttc atgaaatatt gaaaagcatt tgtgcacagg ataaaggtgc
     6301 aaggaccaaa gtctccttag actttccagc atacagaggg tctgacagac tcaggtcaaa
     6361 ggttgcgtct gaagcctaga tcatgaagaa ggccccactc cacaggagaa gcctgtggct
     6421 gatgctgttg caactaggac tatgattgtg aaacttgtgt ctgtggatag cagattcacg
     6481 aatcttgtgc ccaggtatcc acaggccttt tttcatacat tccttggtat aactttgcaa
     6541 gtcctgactt tggacgtgtc gggtgctgat ggtatctcac ttgatatata gtacaagaaa
     6601 gatttttacc cctttaaggg gctggaaata gactggactc acagttacca ttaaaactga
     6661 agttctgtc
//
