LOCUS       XM_039096376            1345 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus similar to brain Zn-finger protein
            (RGD1564243), mRNA.
ACCESSION   XM_039096376
VERSION     XM_039096376.1
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051352.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Feb 22, 2024 this sequence was replaced by
            XM_039096376.2.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1345
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="17"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..1345
                     /gene="RGD1564243"
                     /note="similar to brain Zn-finger protein; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 7 Proteins, and 66% coverage of the annotated genomic
                     feature by RNAseq alignments"
                     /db_xref="GeneID:291174"
                     /db_xref="RGD:1564243"
     CDS             1..1281
                     /gene="RGD1564243"
                     /codon_start=1
                     /product="zinc finger CCCH domain-containing protein
                     15-like"
                     /protein_id="XP_038952304.1"
                     /db_xref="GeneID:291174"
                     /db_xref="RGD:1564243"
                     /translation="MPPKKQAQARGSKKAEQKKKEKIIKEKNFELKNKKVAKQQKFIK
                     AVIHQVTFGQQNPRQVAQNEAEKKLKKDDKKKELQELNELFKQVVTAQKISKGANPKS
                     VVCAFFKQGQCTKGDKCKFFHDLTLERKCEKQSVYIDARDEELEKDTADNWNEKRLEE
                     VVNKRHGEAEKKKSKTQIVCRHFLEAIENNKYRWFWVCLGGEDNSMYRHALPPGFVLK
                     KDKKKEEKENEISLDDLIERERSAPVPNVTKITLESFLAWKKRKRQEKIDKLEQDMER
                     QKDYFKAGKALVTSGREVFEFHPELVNDDDVEADDTRYIQRTEGDEVDDSMGVNDIDL
                     SLYIPRDVEETGITMASLERFSTYASDKDENKLSEASGGLAENGERSDLDKDSGGEEQ
                     ENGSIDAVPVDENLFTGEDLDELEEELNTLDLEE"
ORIGIN      
        1 atgcccccca agaaacaggc tcaggccagg ggcagcaaga aggcagagca gaaaaagaag
       61 gagaagatca ttaaggaaaa aaattttgaa ctaaagaata agaaggtagc gaagcaacag
      121 aaatttatta aggctgtcat tcatcaagtg acatttggac aacagaatcc acgtcaggta
      181 gcacaaaatg aagctgaaaa gaaattgaag aaagatgaca agaagaaaga actacaagaa
      241 ctaaatgagt tgttcaaaca ggtagttact gcacaaaaaa taagtaaagg tgcaaacccc
      301 aagtctgtgg tatgcgcatt cttcaaacag ggacagtgta ctaaaggaga taaatgtaag
      361 ttctttcatg acctcacttt ggagagaaaa tgtgaaaaac aaagtgttta cattgatgca
      421 agagatgaag aacttgaaaa ggatactgcg gataattgga atgagaaaag gctggaagaa
      481 gtagtaaaca agaggcacgg tgaggcagaa aagaaaaaat caaaaactca aatagtgtgt
      541 agacattttc ttgaagctat tgaaaataac aagtatagat ggttttgggt gtgtcttgga
      601 ggtgaggaca attccatgta tcgccatgca cttcctcctg ggtttgtgct aaagaaagac
      661 aaaaagaaag aagaaaaaga aaacgaaatc tcattagacg atctaattga aagagagcgg
      721 tctgccccag ttccaaatgt taccaaaatc actctagaat cttttcttgc atggaagaaa
      781 cggaaaagac aagaaaagat tgataaactt gaacaagata tggagaggca gaaagattac
      841 ttcaaagcag ggaaagcact ggtaaccagt ggtcgagagg tatttgagtt tcatcctgag
      901 ctggtcaatg atgacgacgt ggaagcagac gatacccgtt atattcagag aacagaaggt
      961 gatgaggttg atgactctat gggtgtaaat gacatagatc taagcctgta catcccaaga
     1021 gatgtagaag agacagggat cactatggcc agtcttgaaa gattcagcac atatgcatcc
     1081 gacaaagacg agaacaaatt aagtgaagct tctggaggtc tggctgaaaa tggtgaaaga
     1141 agtgatttgg acaaggacag cggaggggaa gaacaggaaa atgggtccat cgatgctgtt
     1201 cctgttgatg aaaacctgtt cactggtgaa gatctggatg aactagaaga agaattaaac
     1261 acacttgatt tagaagaatg atgacaagga agaaaattag gtcagctcaa tacgatcaac
     1321 ctgaactgag attaattgtt ttgcc
//
