LOCUS       XM_039088900             460 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus similar to ribosomal protein L27
            (RGD1563835), mRNA.
ACCESSION   XM_039088900
VERSION     XM_039088900.1
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051346.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..460
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="11"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..460
                     /gene="RGD1563835"
                     /note="similar to ribosomal protein L27; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 1 EST, 8 long SRA reads, 29 Proteins, and 100%
                     coverage of the annotated genomic feature by RNAseq
                     alignments"
                     /db_xref="GeneID:498085"
                     /db_xref="RGD:1563835"
     CDS             25..432
                     /gene="RGD1563835"
                     /codon_start=1
                     /product="60S ribosomal protein L27-like"
                     /protein_id="XP_038944828.1"
                     /db_xref="GeneID:498085"
                     /db_xref="RGD:1563835"
                     /translation="MGKFMKPGKVVLVLAGRYSGYKAVIVKNIDDGTSDRPYSHVLVA
                     GIDCYPRKVTAAMGKKMAKRSKIKSFVKVYNYSHLMPTRYSVDIPLDKTVVNKDVFRD
                     PALKRKARREAKVKFEERYKTGKNKWFFQKLRF"
ORIGIN      
        1 gggtgctggc tgcttgctgt tgaaatgggc aagtttatga aacccgggaa agtggtgctg
       61 gtcctggctg gacgctactc cggatacaaa gccgtcatcg tgaagaacat tgatgatggc
      121 acctccgacc gcccttacag ccatgtcctg gtggctggaa ttgactgcta tcccagaaaa
      181 gtgacagctg ccatgggcaa gaagatggcc aagcgatcca agatcaagtc ctttgtgaaa
      241 gtttataact acagccacct catgcccaca aggtactctg tggatatccc cttggacaaa
      301 actgttgtca acaaggatgt gttcagagac ccagcactga aacgcaaggc caggcgggag
      361 gccaaggtca agtttgagga gcgatacaag acagggaaga acaaatggtt tttccagaag
      421 cttcgctttt agatgtattt ttgttttcgt cattaaaaaa
//
