LOCUS       NM_001127556            1992 bp    mRNA    linear   ROD 22-NOV-2024
DEFINITION  Rattus norvegicus solute carrier family 5 member 1 like 1
            (Slc5a1l1), transcript variant 2, mRNA.
ACCESSION   NM_001127556 XM_001079784 XM_345092
VERSION     NM_001127556.1
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 1992)
  AUTHORS   Elfeber,K., Kohler,A., Lutzenburg,M., Osswald,C., Galla,H.J.,
            Witte,O.W. and Koepsell,H.
  TITLE     Localization of the Na+-D-glucose cotransporter SGLT1 in the
            blood-brain barrier
  JOURNAL   Histochem Cell Biol 121 (3), 201-207 (2004)
   PUBMED   14986005
  REMARK    GeneRIF: SGLT1 participates in transport of D-glucose across the
            blood-brain barrier and is upregulated after brain ischemia and
            reperfusion.
COMMENT     PREDICTED REFSEQ: This record has not been reviewed and the
            function is unknown. The reference sequence was derived from
            CH473988.1.
            
            On or before May 23, 2008 this sequence version replaced
            XM_001079784.1, XM_345092.3.
            
            ##Evidence-Data-START##
            RNAseq introns :: partial sample support SAMEA5760434 [ECO:0000350]
            ##Evidence-Data-END##
FEATURES             Location/Qualifiers
     source          1..1992
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /db_xref="taxon:10116"
                     /chromosome="20"
                     /map="20p12"
     gene            1..1992
                     /gene="Slc5a1l1"
                     /gene_synonym="RGD1563815"
                     /note="solute carrier family 5 member 1 like 1"
                     /db_xref="GeneID:365549"
                     /db_xref="RGD:1563815"
     exon            1..183
                     /gene="Slc5a1l1"
                     /gene_synonym="RGD1563815"
                     /inference="alignment:Splign:2.1.0"
     CDS             55..1794
                     /gene="Slc5a1l1"
                     /gene_synonym="RGD1563815"
                     /note="isoform 2 is encoded by transcript variant 2;
                     sodium/glucose cotransporter 1-like"
                     /codon_start=1
                     /product="uncharacterized protein LOC365549 isoform 2"
                     /protein_id="NP_001121028.1"
                     /db_xref="GeneID:365549"
                     /db_xref="RGD:1563815"
                     /translation="MEPAEIRHGFTWNHSTLGLSIHSTVDTLVMTFYLLLVLCIGLWM
                     GLSIYSSTVGSGHFMGLAGIGAASGIAVGAFEWNTVFMLFMLGWIFVPIYSKAGVVTL
                     PEYLKKRFGSVRIQLFFSFVFLIVYILSRISMEIGFGAMFLKMVWDIDIYQTMLTVLT
                     ITGVYTITGGLATVAYVETLQAGIMVLGSALLMGYAFYEVGGYQELVNKYSKAIPSTI
                     QQGNWTAKPECYTPREDAFHVFRSCVSGDVPWPGLVLGATTVSLFYGCADQVSVQRFL
                     AGKSRLHMEGGCLLCGYLKLLPMFLMVMPGMISRVLFPDQVACVVPSECEKFCGRGTG
                     CSALAYPVLVLGVMPSGLQGFMLSTVCASLMSSLTSIFNSSSALFTLNIYTWIRPTAT
                     EKELMIAGRFFVIILLAVTIVWIPIIEMAPSETLFEYMQILKSCLTPSVTAVFLLAVF
                     CKRVNEQGAFWGLILGSTIGVFRLLAEFFYGPPTCGEDRQCPIFICGLHYLYFGFCLL
                     LVSILIILAISLATEPIADDHLHGLCWSLRNSQQRRVALDKDMRWKTFPSFTSQPGKE
                     KHPQPREAVLCGP"
     exon            184..288
                     /gene="Slc5a1l1"
                     /gene_synonym="RGD1563815"
                     /inference="alignment:Splign:2.1.0"
     exon            289..348
                     /gene="Slc5a1l1"
                     /gene_synonym="RGD1563815"
                     /inference="alignment:Splign:2.1.0"
     exon            349..453
                     /gene="Slc5a1l1"
                     /gene_synonym="RGD1563815"
                     /inference="alignment:Splign:2.1.0"
     exon            454..559
                     /gene="Slc5a1l1"
                     /gene_synonym="RGD1563815"
                     /inference="alignment:Splign:2.1.0"
     exon            560..640
                     /gene="Slc5a1l1"
                     /gene_synonym="RGD1563815"
                     /inference="alignment:Splign:2.1.0"
     exon            641..861
                     /gene="Slc5a1l1"
                     /gene_synonym="RGD1563815"
                     /inference="alignment:Splign:2.1.0"
     exon            862..997
                     /gene="Slc5a1l1"
                     /gene_synonym="RGD1563815"
                     /inference="alignment:Splign:2.1.0"
     exon            998..1105
                     /gene="Slc5a1l1"
                     /gene_synonym="RGD1563815"
                     /inference="alignment:Splign:2.1.0"
     exon            1106..1256
                     /gene="Slc5a1l1"
                     /gene_synonym="RGD1563815"
                     /inference="alignment:Splign:2.1.0"
     exon            1257..1425
                     /gene="Slc5a1l1"
                     /gene_synonym="RGD1563815"
                     /inference="alignment:Splign:2.1.0"
     exon            1426..1641
                     /gene="Slc5a1l1"
                     /gene_synonym="RGD1563815"
                     /inference="alignment:Splign:2.1.0"
     exon            1642..1992
                     /gene="Slc5a1l1"
                     /gene_synonym="RGD1563815"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 agaaccgttg tagggttgtg gctgtgagtg cttccctgcc tcgggaaggc tgccatggag
       61 cccgcagaga tccgccatgg cttcacttgg aaccatagca ccctgggctt aagtatccac
      121 agcaccgtag acacactggt gatgacgttc tacctcttgc tggttctgtg catcgggctg
      181 tggatgggcc tttccatcta ttcttcaact gttggcagtg gccacttcat gggcctggct
      241 ggcataggcg cagcttctgg aattgctgtt ggggccttcg aatggaatac tgtatttatg
      301 ctcttcatgc ttggctggat attcgttcct atctacagca aggctggggt ggtgacgtta
      361 ccagaatacc tgaagaagag gttcggcagc gtccggatcc agctgttctt ttctttcgtc
      421 ttcttaatcg tctatatcct cagcaggatc tcgatggaga ttggctttgg cgccatgttc
      481 ttaaagatgg tttgggacat tgatatttac cagacaatgt tgaccgtgct gaccatcacc
      541 ggcgtgtata ccatcacagg tggcctggcc actgtggctt atgttgagac cttacaagct
      601 ggcattatgg ttttgggctc agccttgtta atgggttatg ccttttatga agtgggaggg
      661 tatcaggagc tggtgaataa gtactccaaa gccatcccga gtacgatcca gcaggggaac
      721 tggacggcca agccagagtg ctacacgcct cgtgaggatg ctttccatgt cttccgaagt
      781 tgtgtctctg gagacgtccc ctggcccgga ctcgtcttag gtgccactac cgtctccttg
      841 ttctatgggt gtgctgatca ggtttctgtc cagcggtttc tggcgggaaa gagccggctt
      901 cacatggaag gtggctgcct cttgtgtggc tacctaaagc tgcttcccat gttcctcatg
      961 gtgatgccag ggatgatcag ccgcgtcttg ttcccagatc aagtggcatg cgtcgtacct
     1021 tcggaatgtg agaagttctg tggcagagga accggttgta gtgccctggc ttacccggtg
     1081 ctggtcttag gagtgatgcc ttctggctta caaggcttta tgctgtccac agtgtgtgcc
     1141 tccctcatgt cttccttgac gtccattttc aacagctcca gcgccctgtt cacgctgaac
     1201 atctacacct ggatccggcc caccgccaca gagaaggagc tcatgatagc cggcaggttt
     1261 ttcgttataa tcttacttgc cgtcaccatt gtctggatcc ccattataga aatggcaccc
     1321 agcgagacac tgtttgagta catgcagatt cttaagagct gtctgacacc gagcgtgact
     1381 gccgtctttc tgctggctgt gttttgcaag agggtgaacg agcagggtgc cttctggggg
     1441 ctgattctgg gaagcacgat tggtgtcttt cgactgctgg ctgagttttt ctatggcccc
     1501 ccgacctgcg gggaagaccg ccagtgtccc atattcatct gcggcctcca ttacctctat
     1561 tttggctttt gccttctctt ggtctccatt ctgatcatac tggccatctc cttagccacg
     1621 gaaccgattg cagatgacca tctccacggt ctttgttgga gtttacggaa cagccaacag
     1681 aggagagtgg ctttagacaa agatatgagg tggaagacct tccccagctt cacatcccag
     1741 ccaggtaagg agaaacatcc gcagcctcgg gaagccgtcc tgtgtggacc ctgaagctgg
     1801 ggcagctgcc ccaaacacct tctacccgcc attctaccca cccctcctca ccccctttcc
     1861 ccgcccacca cagacacatc cagatagaag cgctcgcctt ctccccacta aaatgcttct
     1921 ggggttgttc ccacacgtgg agtctatgaa gtcacgtgga ccccagaggg aagggaagag
     1981 aagaaagatt ag
//
