LOCUS       XM_039082318            2968 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus similar to Discs, large homolog 5
            (Placenta and prostate DLG) (RGD1563738), transcript variant X1,
            mRNA.
ACCESSION   XM_039082318
VERSION     XM_039082318.1
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051343.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2968
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="8"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..2968
                     /gene="RGD1563738"
                     /note="similar to Discs, large homolog 5 (Placenta and
                     prostate DLG); Derived by automated computational analysis
                     using gene prediction method: Gnomon. Supporting evidence
                     includes similarity to: 100% coverage of the annotated
                     genomic feature by RNAseq alignments, including 3 samples
                     with support for all annotated introns"
                     /db_xref="GeneID:367059"
                     /db_xref="RGD:1563738"
     CDS             1408..2091
                     /gene="RGD1563738"
                     /codon_start=1
                     /product="disks large homolog 5-like isoform X1"
                     /protein_id="XP_038938246.1"
                     /db_xref="GeneID:367059"
                     /db_xref="RGD:1563738"
                     /translation="MYSRLRKHFGRVNVDFGQTGVRESRLSSKTNDGQRKVAWGMRKD
                     GRLTSSPGPVVINKDANTENTEEQRLIRQLQSATEERNELRDLLTYVTERYRNNRASR
                     YIRSNPFYEKLKIKEREVMSLLHNLEMRNIEHCEKFQELQKEINFYRNLPSQIHMDKI
                     CVQKKLFPFKKASKAEHLDCAPLLQKYLVDLHKNDKDEQEKKSNLQTQPHLVGTSSCV
                     SLTSSHSIC"
ORIGIN      
        1 tgattccggt acaacatttt acactaatat aatttagttc atgaagtacc ttttccaatt
       61 ttgccaaata caaatggact gaatattgtg acagtcattc ttatctgatg catcccataa
      121 atattctaat tttatctagc tgatcagtgt taaagataaa ggtatttttt aggtgtaaaa
      181 tgggtaatga ttaggtgacc tccctctgta ctaaggtgtg tcagctttca atttttagtt
      241 ctttactggc atagagctaa gagctggcag gactttttct tgtcatttct agggcccagc
      301 atgaggtttg cttttttgta gatgtttgac cttcttacca gctcaacata aggtaagaga
      361 tctattagct gttgtctcac ctgatttcga ttgaacgaaa taaagatctg atggcccaga
      421 gctgcagcag aaagtatgtg ggcataactc caggcaaaca gaggaacata gggtgagaca
      481 agctgaagct ggagattcag aatagacatg gtagggaaga gatatggacc aaaacacggc
      541 atacttgtaa agagataatc acccgttggg tctccaaact agaagagtgg ggttaaatat
      601 agagaagata gcacgtgctc agtgagaggc ccaagataca aactgtcaga cagaatctca
      661 tgatagagct tacataggcc tgtgagcaat gctcctttgg tgacgttggt gcaaagagga
      721 gaaccccaca agcaccatgc gggtgccttc attggtggct aaagcatttc attttcctct
      781 ggcaatttga ctccacactg ttcctagcac cataatgatt tcaactcttt ctcctaaggg
      841 attttggggc aactgtcgaa tgctaagtac aaggcttcat gagttttccc ataacacaca
      901 cccatgttgc tacctatcct gcagtctatt tcttgatgtg atttcaagca catgtacata
      961 aggacacagg agaaactttt gactgcatat tcaaactggt attatttctc aggaattttt
     1021 aatggctaat attgatgaat aaggataatt tgacttaaga tgagacattt ttgggcagga
     1081 tttggaggga aacattcatt aaaatgcata ggaattactc gggtttttat aatcaagcct
     1141 tgaggaaaat ttggccttgg aagcaggagg tactcagggg ctatgccctg ggaaggtatc
     1201 ctggaaaggg cacctcagct tatgcactat acagggagat tattagcaga gaggcaaagt
     1261 ctgttcacca tgacatcagc tgacccttct tgaacattct attgtgtcct agagagttct
     1321 tggcatcctc tgtgatgtca ccagtgttgt agtaaccacc agtgccctac tttttctcag
     1381 tccctgcttg cagatacaca ggaagacatg tattcccgtc ttcgcaagca ttttgggaga
     1441 gtgaacgttg attttggaca gactggagtg agggaatctc gcctttcatc aaaaacaaat
     1501 gatggacaaa gaaaggtggc ctggggaatg cggaaggatg ggagactgac atcatcccct
     1561 ggccctgtgg taatcaacaa ggacgccaac acggagaaca cagaagagca gagactgatt
     1621 agacagctgc agtcagctac tgaggagaga aatgagctaa gagatctcct gacttacgtg
     1681 acagagagat acaggaacaa cagggccagc cgctacatca ggtcaaatcc attttatgaa
     1741 aaattgaaga taaaggagag ggaggtcatg tcattactgc acaacttaga gatgaggaac
     1801 atcgagcatt gtgagaaatt tcaggagctc cagaaggaga ttaacttcta tcgcaacctg
     1861 cccagccaga tccatatgga caagatatgt gtgcagaaga agttgttccc attcaagaag
     1921 gcgagcaaag cagaacatct ggattgtgca ccactgctac agaaatattt ggttgacttg
     1981 cacaagaacg ataaggatga acaggagaag aagagcaacc tccagaccca gccacatctg
     2041 gtagggacaa gcagctgtgt cagcttaaca tcatctcatt ccatttgcta atttcatact
     2101 tgtttgcttt cccctaccag cttactaatt tacactccca acagtacaac cacctcatgc
     2161 aatggaattg ttcattgctc tgtctatgct caactattct gggaagtcca gcacttttca
     2221 gaaactgaat gattaacaag tatgctttgc tgctcttttt gaagctgcag tctagaaatg
     2281 gtgacagaca attgatatca taatatttcc tgtcccagtg atagaatgga tgctatgtag
     2341 tgctttgaac aagttttggt cctgtgatca atgacatttt ttggtcatgt gacctccaag
     2401 ttgggaagca cctttcaggg ataattaccg agtgcaaatg gcaaattaat ccttgtcatt
     2461 gtctttaatc ttggtgacac atggccttca catttcttcc tgtaacccaa tgaggtctct
     2521 tcccattgcg ctgttcatgg tgtgcactgg tttaactctg agtcccagat gggcagcaca
     2581 cattactgtc agggttgctg tagactttgc cctgaccaca gacacaccag caacgttatc
     2641 agttaacaca tcaatggtga cctccaatag agctgaggtg gtacaaggca gaaacctgac
     2701 agctggcatg caggtctcca acaaatcagt gtctgaataa ctgccttcct ctccctggtc
     2761 tcagaaagtg caagagagca ggaatgggac acacagcagg aagggagcat cctgaagaat
     2821 ctgttgcttt ctcaggagtc ccctgctgac taccatcctg aatagtaaca acattttttg
     2881 gatgaatatt atccctcaca gttaatttat taattgctaa gaaaccctaa atttatcttt
     2941 cactaagcga gcctgactga ttgaggtc
//
