LOCUS       XM_039082879             508 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus similar to ribosomal protein S23
            (RGD1563705), mRNA.
ACCESSION   XM_039082879
VERSION     XM_039082879.1
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051343.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Feb 22, 2024 this sequence was replaced by
            XM_039082879.2.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..508
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="8"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..508
                     /gene="RGD1563705"
                     /note="similar to ribosomal protein S23; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 1 EST, 2 long SRA reads, 14 Proteins, and 100%
                     coverage of the annotated genomic feature by RNAseq
                     alignments"
                     /db_xref="GeneID:501058"
                     /db_xref="RGD:1563705"
     CDS             26..457
                     /gene="RGD1563705"
                     /codon_start=1
                     /product="40S ribosomal protein S23-like"
                     /protein_id="XP_038938807.1"
                     /db_xref="GeneID:501058"
                     /db_xref="RGD:1563705"
                     /translation="MGKCRGLCTARKLRSHRRDQKWHDKQYKKAHLGTALKANLFGGA
                     SHAKGIVLEKVGVEAKQPNSAIRKCVRVQLSKYGKKITAFVPNDGCLNFIEENDKVLV
                     VGFGRKGHAVGDIPGVRFKVVKVANVSLLALYKGKKERPRS"
ORIGIN      
        1 ctctccggcc cgtggcgcca gcaagatggg taagtgtcgt ggtctctgta ctgcccggaa
       61 gctccgcagt caccgacggg accaaaagtg gcatgataaa cagtacaaga aagcccactt
      121 gggcacagcc ctgaaggcca atctgtttgg gggtgcctct cacgcaaagg gaattgtgct
      181 ggaaaaagta ggggttgaag ccaaacagcc aaattctgcc atccggaagt gtgtcagggt
      241 gcagctcagt aagtacggca agaagatcac agcgttcgtg cccaatgacg gttgcttgaa
      301 cttcattgag gaaaatgata aagttctggt tgttggattt ggtcgcaaag gccatgccgt
      361 gggtgatatt cctggagtcc gctttaaggt ggttaaagta gccaatgtgt ctcttttggc
      421 tctgtacaaa ggcaagaagg aaagaccaag atcataaaat tttgacaatg gaaacagaat
      481 aataaatttt catatccaga aaaaaaaa
//
