LOCUS       NM_001100985            1908 bp    mRNA    linear   ROD 28-MAR-2024
DEFINITION  Rattus norvegicus speckle-type BTB/POZ protein family member 2 like
            1 (Spopfm2l2), mRNA.
ACCESSION   NM_001100985 XM_001053995 XM_345240
VERSION     NM_001100985.2
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 1908)
  AUTHORS   Choo,K.B., Hsu,M.C., Chong,K.Y. and Huang,C.J.
  TITLE     Testis-specific expression and genomic multiplicity of the rat
            Rtdpoz genes that encode bipartite TRAF- and POZ/BTB-domain
            proteins
  JOURNAL   Gene 387 (1-2), 141-149 (2007)
   PUBMED   17071022
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            JAXUCZ010000002.1.
            
            On Mar 10, 2021 this sequence version replaced NM_001100985.1.
            
            ##Evidence-Data-START##
            Transcript exon combination :: AY902367.1 [ECO:0000332]
            RNAseq introns              :: mixed sample support SAMEA5760389,
                                           SAMN16093046 [ECO:0006172]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on longest protein
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-187               JAXUCZ010000002.1  184642338-184642524 c
            188-342             JAXUCZ010000002.1  184570741-184570895 c
            343-1908            JAXUCZ010000002.1  184568613-184570178 c
FEATURES             Location/Qualifiers
     source          1..1908
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN"
                     /db_xref="taxon:10116"
                     /chromosome="2"
                     /map="2q34"
     gene            1..1908
                     /gene="Spopfm2l2"
                     /gene_synonym="RGD1563667; Tdpoz-T2"
                     /note="speckle-type BTB/POZ protein family member 2 like
                     1"
                     /db_xref="GeneID:365855"
                     /db_xref="RGD:1563667"
     exon            1..187
                     /gene="Spopfm2l2"
                     /gene_synonym="RGD1563667; Tdpoz-T2"
                     /inference="alignment:Splign:2.1.0"
     exon            188..342
                     /gene="Spopfm2l2"
                     /gene_synonym="RGD1563667; Tdpoz-T2"
                     /inference="alignment:Splign:2.1.0"
     exon            343..1908
                     /gene="Spopfm2l2"
                     /gene_synonym="RGD1563667; Tdpoz-T2"
                     /inference="alignment:Splign:2.1.0"
     CDS             377..1459
                     /gene="Spopfm2l2"
                     /gene_synonym="RGD1563667; Tdpoz-T2"
                     /codon_start=1
                     /product="RAF domain and POZ/BTB containing protein T2"
                     /protein_id="NP_001094455.2"
                     /db_xref="GeneID:365855"
                     /db_xref="RGD:1563667"
                     /translation="MSGDLEAKSCGYTHISVQKFCYEWTISNFSFCMDGIRENVTSPR
                     FSLEASEEMQWCLRIFPNGVDEESKDYLSVYLGLLSCPKSPVWAKVQFWIINAQGEKY
                     LITKMSNVLRFLPNQYWGYKKFILRDFLLSHRHRLLPEDQFTLCCKVSIVERSFSMHG
                     DNMRPAIKDPRQMLVNDIGELWENSLFTDCSLVVAGQEFRSHKAILAACSPVFRAMFE
                     HEMLESLTNRIEIHDIHLQVFKEMMAFIYTGKAPHLHSRSMATGLLAAADKYDLQGLK
                     GMCEDALCRNLSVKNAVPTLILADLHKTEHLKTRAMDFIILHASEVSDTVGWKSMVES
                     HPHLVEEAFYSLSSIQCPGFEPSLEC"
ORIGIN      
        1 gagtcttcgc cgcccgcttt tggttccggg agactttgcg tccggctctc agccaccgtt
       61 accgataact cgaactcccg cacaggcgca gggagacagc tgatacattt agttccttgt
      121 ccccaggcag ttaacgctcc agccagagaa agactcatca tctccgccgg gtaggagcac
      181 aaacaagcct gtgtaagttt ataggagaag gacgcttgga gttgctgctt gcttgctctc
      241 atcttactag caagctcatt tcttcactgg catctgaacg tacatcttca ggattctggt
      301 cgatactgaa gaagacatga gacttcaaac cttgtagaat aaatcaactt taacctccaa
      361 actacctcca gaagacatgt caggggacct ggaagccaag agctgtggct acacacatat
      421 cagtgttcag aagttctgct atgagtggac cattagcaac ttttcatttt gcatggatgg
      481 aattcgtgaa aatgttacaa gcccaaggtt ctcattagag gccagtgaag aaatgcaatg
      541 gtgtttgagg atattcccaa acggtgttga tgaagaaagc aaagattacc tgtctgttta
      601 cctgggtttg ctcagttgtc caaagagccc agtttgggca aaggtacagt tctggatcat
      661 aaacgcccaa ggagagaaat atcttattac aaaaatgtca aatgttttaa ggtttctgcc
      721 aaatcaatac tggggataca aaaagttcat ccttcgagat ttcctcctct cccataggca
      781 tcggcttctc cctgaagacc agttcacctt gtgctgcaag gtgagcatag tagaacgctc
      841 ctttagcatg catggagata acatgagacc tgcaatcaag gatccaaggc agatgttggt
      901 caacgacata ggagagctgt gggaaaattc cctcttcaca gactgcagcc tggtggtagc
      961 tggccaggaa ttcagatctc acaaggccat tctagcagct tgctctccag ttttcagagc
     1021 catgtttgaa catgaaatgc tagagagctt aacaaaccgc attgagatcc atgacattca
     1081 cctgcaagtc tttaaggaaa tgatggcctt catttacaca gggaaggcac cacacctcca
     1141 cagccgctca atggccacag gtttgttggc agctgctgac aagtatgacc tgcagggctt
     1201 gaagggcatg tgtgaggatg ccttgtgcag gaacctctct gtgaagaatg ctgtacctac
     1261 tctcatcctg gctgacctcc acaaaacaga gcacctgaag actagggcca tggatttcat
     1321 tatacttcat gcttctgaag tctctgatac cgtggggtgg aagtcaatgg tggagtcaca
     1381 tccccacttg gtggaggaag cattttactc cctgtcttcc atacagtgtc ctggctttga
     1441 gccctcactt gaatgctgaa agacatttta ggagcttaac ggctatgacc tacacctgtc
     1501 ttccaacagc agcaaccagt gtttttacaa atgacttctg tttagactac agtattgctg
     1561 gagcatttac agtgaatctg gggaaaggca gcctggtggc tcaggattta aaacggctgt
     1621 aatatgtcaa aatggtgtat gggcaaagag cagctctagg gtcatggata ctctacctga
     1681 caattaccct gttgatgctg tttgattctt gtctgatgtc ttggaaactg ggattcaact
     1741 ggcctgatgc acaacccaac ctactttctt tggagaaact tgtctgcatt ggactgagca
     1801 gaatagatga cctaacttat gtgtattaag tgacatgtaa agtttttcac ctaattctgg
     1861 tgtattttct atctgtaaat aaaaattctt tcaactttac tgtatgta
//
