LOCUS       XM_039103709            1851 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus similar to retinoblastoma binding
            protein 4 (RGD1563620), mRNA.
ACCESSION   XM_039103709
VERSION     XM_039103709.1
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051337.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1851
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="2"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..1851
                     /gene="RGD1563620"
                     /note="similar to retinoblastoma binding protein 4;
                     Derived by automated computational analysis using gene
                     prediction method: Gnomon. Supporting evidence includes
                     similarity to: 22 Proteins, and 96% coverage of the
                     annotated genomic feature by RNAseq alignments"
                     /db_xref="GeneID:310511"
                     /db_xref="RGD:1563620"
     CDS             1..1272
                     /gene="RGD1563620"
                     /codon_start=1
                     /product="histone-binding protein RBBP4"
                     /protein_id="XP_038959637.1"
                     /db_xref="GeneID:310511"
                     /db_xref="RGD:1563620"
                     /translation="MADKEVAFEDVVEERVINEEYKIWKNTPFLYDLVMTHALEWPSL
                     TAQWLPDVTRPEGKDFGIHRLVLGTHTSDEQNHLVASVQLPNDDAQFDASYYDSEKGE
                     FGGFGSVSGKIEIEIKINYEGEVNRARYMPQNPCIIATKTPSSDVLVFDYTKHPSKPD
                     PSGECNSDLHLRGHQKEGYGLSWNPYLSGYLLSASDDHTICLWDISAVPKEGKVVGAK
                     TIFTGHTAVVEDVSWHLLHESLFGSVADDQKLMIWDTRSNNTSKPSHSVDAYTAEVNC
                     LSFNPNSEFILASGSPDKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASS
                     GTDRRLNVWDLSKIGEEQSPEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVS
                     EDNIMQVWQMAENIYNDEDPEGSVDPEGQGS"
ORIGIN      
        1 atggctgaca aggaagtggc ctttgaggac gtggtggaag aacgtgtgat caacgaggag
       61 tacaagatat ggaagaacac cccatttctt tatgatttgg tgatgaccca tgccctggag
      121 tggcccagcc taactgccca gtggcttcca gatgtgacca ggcctgaagg gaaagatttc
      181 ggcattcatc ggcttgtcct gggaacacac acatcagatg aacaaaacca ccttgttgcc
      241 agtgtccagc tccctaatga cgatgcgcag tttgatgcat cctattatga cagtgaaaaa
      301 ggagaatttg gaggttttgg ttctgtcagt gggaaaattg aaatagaaat caagataaac
      361 tatgaaggag aagtaaacag ggccaggtac atgcctcaga acccttgcat cattgcaacg
      421 aagactccat ccagtgatgt tcttgttttt gactacacaa agcacccttc taaaccagac
      481 ccttctggag aatgcaactc agacttgcat ctccgtgggc atcagaagga aggttatggg
      541 ctttcttgga atccatatct cagcgggtac ttacttagtg cttcagacga ccataccatc
      601 tgcctgtggg acatcagtgc agttcccaaa gaaggaaaag tggtgggtgc aaagaccatc
      661 tttacagggc acacagcagt agtggaggac gtttcctggc atctgctcca tgagtctctg
      721 ttcgggtcag ttgctgatga ccaaaaactc atgatttggg atactcgttc aaacaatact
      781 tccaagccaa gccactcggt tgatgcttac acagctgaag tgaattgctt atctttcaat
      841 cctaatagtg agttcattct tgcctcggga tcacctgaca agactgttgc cttgtgggat
      901 ctgagaaatc tgaaactcaa gttgcattcc tttgaatcac ataaggatga aatattccaa
      961 gttcaatggt cacctcacaa tgagactatc ttagcttcca gtggcactga tcgtcggctg
     1021 aatgtctggg atctaagtaa aattggagaa gaacagtccc cagaagatgc agaggatggc
     1081 ccaccagagt tgttgtttat tcatggtggt cacactgcta agatatctga cttctcctgg
     1141 aatcccaatg aaccttgggt aatttgttct gtatcagaag acaatatcat gcaagtgtgg
     1201 cagatggcag agaacattta taatgatgaa gaccctgaag gaagtgtgga tccagaagga
     1261 caaggatcct agatatgtct gcacgtgtga ttttagactc tccttgtttt cccctgaagc
     1321 ctgagatgga tttaacattg gtttgggaca cagaatttgt tcagctgtcc aacttcaata
     1381 ggtcccacca acaatgctat tagcccaaac catgggtgtt ttctaaatct taactggggg
     1441 gcttaattca gcaaagcctc cattggtggc tccagttgtg gctggatagc tgaacagagt
     1501 ctgttttttg ttgtgtgtgg tttttacttt ctttttcttt ctttctttct ttctttcttc
     1561 ttaatttttt ttctttttta aactggggac caccaagttg taaagatgta catttttttc
     1621 ctggcagttg taccactggt gcactgtcat gttgagaaag agtggattgc tagtttgtat
     1681 ttgtgtctaa gattaaatta atccttgata aacgttgctt ttgaccacta tagtttgacg
     1741 ccatctccat tttggctaac ctgtctcacc atcaggcctg ttaactctcc atgactaact
     1801 gtgtaagtgc ttataacggt ataaattgct tttctatata aaaaaaaaaa a
//
