LOCUS       XM_039078186             412 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus similar to 40S ribosomal protein S25
            (RGD1563613), mRNA.
ACCESSION   XM_039078186
VERSION     XM_039078186.1
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051341.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Feb 22, 2024 this sequence was replaced by
            XM_039078186.2.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..412
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="6"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..412
                     /gene="RGD1563613"
                     /note="similar to 40S ribosomal protein S25; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 4 Proteins, and 93% coverage of the annotated genomic
                     feature by RNAseq alignments"
                     /db_xref="GeneID:366605"
                     /db_xref="RGD:1563613"
     CDS             38..412
                     /gene="RGD1563613"
                     /codon_start=1
                     /product="40S ribosomal protein S25-like"
                     /protein_id="XP_038934114.1"
                     /db_xref="GeneID:366605"
                     /db_xref="RGD:1563613"
                     /translation="MPPKDDKKKKDAGKSAKKDKDPINKSGGKAKKKWSKGKVLDKLN
                     NLVLFDKATYDKLCKEVPNYKLITPCVVSERLKILGSLVRAALQELLSKGLIKLVSKH
                     RAQVIYTRNTKVGDVSAASEDA"
ORIGIN      
        1 tggctgcagt agtccacact actctctgag cttctccatg ccgcccaaag acgacaagaa
       61 gaagaaggat gctggaaagt ccgccaaaaa agacaaagac cctataaata aatctggtgg
      121 caaggccaaa aagaagtggt ccaaaggcaa agttctggac aagctgaaca atctcgtcct
      181 gtttgacaaa gctacttatg acaaactttg taaggaagtt cccaactata agcttattac
      241 tccatgtgtg gtctccgaga gactgaagat tctaggttcc ttggtcaggg cagcccttca
      301 ggagctactt agtaaaggac ttatcaagct ggtttcaaag cacagagccc aagtaattta
      361 caccagaaac acaaaggttg gagatgtctc agctgctagt gaagatgcat ga
//
