LOCUS       XM_039100258             637 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus similar to cysteine-rich protein 2
            (RGD1563606), mRNA.
ACCESSION   XM_039100258
VERSION     XM_039100258.1
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051356.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Feb 22, 2024 this sequence was replaced by
            XM_039100258.2.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..637
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="X"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..637
                     /gene="RGD1563606"
                     /note="similar to cysteine-rich protein 2; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 15 Proteins, and 96% coverage of the annotated genomic
                     feature by RNAseq alignments"
                     /db_xref="GeneID:367749"
                     /db_xref="RGD:1563606"
     CDS             27..635
                     /gene="RGD1563606"
                     /codon_start=1
                     /product="cysteine-rich protein 2-like"
                     /protein_id="XP_038956186.1"
                     /db_xref="GeneID:367749"
                     /db_xref="RGD:1563606"
                     /translation="MASKCPKCDKTVYFAEKVSSLGKDWHKFCLKCEHCKKTLTPGGH
                     AEHDGKPFCHKPCYVTLFGPKGVNIGGAGSYIYEKPPKKAPQVPVVQTEERKTSGPPK
                     GPSKASNVTTFTGEPNMCPRCNKRVYFAEKVTSLGKDWHRPCLRCDRCSKTLTPEGHA
                     EHDSQPYCHKPCNGILFGPKGVNTGAVGSYIYDKDPEGTIQP"
ORIGIN      
        1 gcgcggactg acggagcgca ccgaccatgg cctccaagtg tcccaagtgt gacaagaccg
       61 tgtacttcgc cgagaaggtg agctccctgg gcaaggactg gcacaagttc tgcctcaagt
      121 gtgagcactg caaaaagaca ctgacgcccg gcggccatgc tgagcatgat gggaaacctt
      181 tctgccacaa gccctgttat gtcacactgt ttggacccaa aggcgtgaat atcgggggcg
      241 ctggttccta catctacgag aagcctccaa agaaggcccc tcaggtccct gtggtgcaaa
      301 ctgaagagcg aaagactagc gggcccccca agggtcccag caaagcctct aatgtcacca
      361 cgttcactgg ggagcccaac atgtgtcctc gatgcaacaa gagagtgtac ttcgctgaga
      421 aggtgacctc cctgggcaag gactggcacc ggccctgcct gcgctgtgac cgctgctcca
      481 agacactgac cccagagggg catgctgagc atgatagcca accctactgc cacaagccct
      541 gcaatggaat actctttgga cccaaaggag tgaatactgg tgctgtgggc agttatatct
      601 atgacaagga cccggaaggc acaattcagc cttagat
//
