LOCUS       XM_039096247            1393 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus similar to Tpi1 protein (RGD1563601),
            mRNA.
ACCESSION   XM_039096247
VERSION     XM_039096247.1
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051352.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Feb 22, 2024 this sequence was replaced by
            XM_039096247.2.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1393
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="17"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..1393
                     /gene="RGD1563601"
                     /note="similar to Tpi1 protein; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 9
                     ESTs, 2 long SRA reads, 33 Proteins, and 100% coverage of
                     the annotated genomic feature by RNAseq alignments"
                     /db_xref="GeneID:498731"
                     /db_xref="RGD:1563601"
     CDS             54..803
                     /gene="RGD1563601"
                     /codon_start=1
                     /product="triosephosphate isomerase-like"
                     /protein_id="XP_038952175.1"
                     /db_xref="GeneID:498731"
                     /db_xref="RGD:1563601"
                     /translation="MAPSRKFFVGGNWKMNGRKKCLGELICTLNAAKMPADTEVVCAP
                     PTAYIDFARQKLDPKIAVAAQNCYKVTNGAFTGEISPGMIKDLGATWVVLGHSERRHI
                     FGESDELIGQKVNHALSEGLGVIACIGEKLDEREAGITEKVVFEQTKAIADNVKDWSK
                     VVLAYEPVWAIGTGKTATPQQAQEVHEKLRGWLKCNVSEGVAQCTRIIYGGSVTGATC
                     KELASQPDVDGFLVGGASLKPEFLDIINAKQ"
ORIGIN      
        1 taaaactaag agcaggtttt tgtactgacc ttcagagagt tgatccttgt gcaatggcgc
       61 cttccaggaa gttcttcgtc gggggcaact ggaagatgaa cgggaggaag aaatgcctgg
      121 gagaactcat ctgcaccctg aacgcagcca agatgccggc agacaccgag gtggtttgtg
      181 caccgccaac cgcctacatc gacttcgcca ggcagaagct ggatcccaaa attgctgtgg
      241 ctgcacagaa ctgctacaaa gtgaccaatg gggccttcac tggggaaatc agccctggca
      301 tgatcaaaga cttaggagct acctgggtgg tgctgggaca ctctgaaaga agacacatct
      361 ttggggaatc agacgagttg attgggcaga aagtgaacca tgccctatcc gagggactcg
      421 gagtgatcgc ctgcattggg gagaagttag acgaaaggga agctggcatc actgagaagg
      481 ttgtttttga gcaaaccaag gccatcgcag ataatgtgaa ggactggtcc aaggtggtcc
      541 tggcctatga accggtatgg gccattggga ctggcaagac tgcaacccct caacaggccc
      601 aggaagtaca cgagaagctc cggggatggc tgaaatgcaa cgtctctgag ggggtggctc
      661 agtgcactcg gatcatttat ggaggttctg taactggagc gacttgcaaa gagctggcaa
      721 gccagcctga tgtggatggc ttcctcgtgg gcggtgcatc tctcaagcct gaattcctgg
      781 acatcatcaa tgccaaacaa tgagcactgc tcatccccct accttcctgc gtagcctgga
      841 ccaggttgcc cagaagttta gtaactgctc ccgccagtca catgcttctg atgacatcat
      901 caactccatc ttgtgaccta atccatactg taccttcctg agtctcttac ctccccataa
      961 tagttgggac caggccaatc cctttaccac ttacaatggg taaaatcaaa tatgtcacca
     1021 agatggcttc ctgaggaggg gaaggagtag aactggctgt ccctttgggc cctaatgggt
     1081 gaaaacggcc ttccattggt ttgggatgga aactcacggc tggaccacag gaagtaggct
     1141 tcttgtcact ttggcctgtc acttagatgg ccttggctct agcttcactc ccaagcccta
     1201 ctggatgtgt gatgcagaga ttcagagtct tcgggtctga atttcagtgt acattaaggc
     1261 caagatcctc ttcctcttag aggcctggga tatcccctcc cccgcagtgc cgaagccctt
     1321 gtattgtgtt tgtgaaccat cctacgtata agggaaataa acacctgggc ctaaaaaaaa
     1381 aaaaaaaaaa aaa
//
