LOCUS       XM_006257014            1176 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus similar to melanoma antigen 2
            (RGD1563590), mRNA.
ACCESSION   XM_006257014
VERSION     XM_006257014.4
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051356.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Feb 22, 2024 this sequence was replaced by
            XM_006257014.5.
            
            On Jan 21, 2021 this sequence version replaced XM_006257014.3.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1176
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="X"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..1176
                     /gene="RGD1563590"
                     /note="similar to melanoma antigen 2; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 4
                     Proteins, and 100% coverage of the annotated genomic
                     feature by RNAseq alignments"
                     /db_xref="GeneID:302435"
                     /db_xref="RGD:1563590"
     CDS             21..1049
                     /gene="RGD1563590"
                     /codon_start=1
                     /product="melanoma-associated antigen B5-like"
                     /protein_id="XP_006257076.4"
                     /db_xref="GeneID:302435"
                     /db_xref="RGD:1563590"
                     /translation="MPHDQKSKLHSRENSYQAGGGAQAYGDAEEIAEAAAEAAEESSA
                     KSQSQPGAEYSRNHRAPPKAKPSAKLILSSSSSESDESSHEESEPSVQKDRPFLHQDL
                     IERRVAILLQYLLHNYNLKQLTTKEEMLKVITKKYEKDFPEILRKASEKLEDAFAVEV
                     REVSSSQPSYDLISKLKLPNNGRIRAGKGLPKTGFLMSILGIIFIQGNSASEEDIWKI
                     LKKKRIYPGKKHRVFGEPRKLMTQYLVKLKYLEYRQVAHSDPPRYEFLWGPQAHAETS
                     KMKVLEYLAKINKTTPHAISALYQEALKDEKERAEVRDEDNTDTTDQSTEGSPEKSPT
                     ASTTPVDT"
ORIGIN      
        1 tcaccttaat cagagtcatc atgcctcatg atcagaagag taagctccat tctcgggaaa
       61 acagttacca ggccggaggt ggggctcagg cttatggaga tgctgaggaa atagcagaag
      121 cagcagcaga agcagcagaa gagtcttctg ccaaatctca gagccagcct ggggctgagt
      181 attccaggaa tcacagagca cctccgaaag caaaaccatc tgccaaactt attctgagta
      241 gctcttcctc agaatcagat gaaagttccc atgaggaaag tgagccaagt gtacaaaagg
      301 atcgcccttt tctgcaccaa gatctgatcg aaaggcgggt ggcaatactg ttacagtacc
      361 tgctccacaa ctacaatttg aagcagctca ctaccaagga agaaatgctg aaggttatca
      421 ccaagaagta tgaaaaagac tttcctgaga tcctcaggaa agcctctgag aagctggaag
      481 atgcctttgc agtggaagtg agggaagtca gctccagtca accctcatac gacctcatca
      541 gcaagctgaa gctccccaac aatgggagga tccgtgctgg taaaggctta cccaagaccg
      601 gtttcctgat gagtatcctg ggtatcatct tcattcaagg caacagcgcc agtgaagaag
      661 acatttggaa aatcctgaag aagaagcgaa tctatccagg gaagaagcac cgcgtctttg
      721 gtgagccccg gaagctcatg acccagtatt tggtgaagct gaagtacctg gagtaccggc
      781 aggtggccca cagtgatcct ccacgctatg agttcctgtg gggtccccaa gcccatgctg
      841 aaacaagcaa gatgaaggtc ctggaatatt tggccaagat caacaaaaca acacctcatg
      901 ccatctcagc cctttaccaa gaggctttga aagatgagaa agagcgagca gaagtcagag
      961 atgaagataa tactgatacc actgaccaat ctactgaagg ttccccagaa aaatcaccaa
     1021 cagcttctac cacccctgtt gacacttgaa cttttcctgt caagaagaca atgcatcaca
     1081 ttttttcctt gataatataa agtagatata cagttagaaa gatgacaaga tgttcaaacc
     1141 taatttcctt taaatagttt tactatgtgg tttggt
//
