LOCUS       XM_039096338             442 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus similar to S100 calcium binding
            protein A11 (calizzarin) (RGD1563581), mRNA.
ACCESSION   XM_039096338
VERSION     XM_039096338.1
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051352.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Feb 22, 2024 this sequence was replaced by
            XM_039096338.2.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..442
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="17"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..442
                     /gene="RGD1563581"
                     /note="similar to S100 calcium binding protein A11
                     (calizzarin); Derived by automated computational analysis
                     using gene prediction method: Gnomon. Supporting evidence
                     includes similarity to: 3 ESTs, 1 long SRA read, 3
                     Proteins, and 100% coverage of the annotated genomic
                     feature by RNAseq alignments"
                     /db_xref="GeneID:502110"
                     /db_xref="RGD:1563581"
     CDS             10..282
                     /gene="RGD1563581"
                     /codon_start=1
                     /product="protein S100-A11-like"
                     /protein_id="XP_038952266.1"
                     /db_xref="GeneID:502110"
                     /db_xref="RGD:1563581"
                     /translation="MESLIAVFQKYTGKDGNSCQFYKTEFLSFMNTELAAFTKNQKDP
                     GVLDRMMKKLDLNSDGQLDFQEFLNLIGGLAIACHESFLQTSQKRI"
ORIGIN      
        1 gagagatgca tggagtccct gattgctgtt ttccagaagt acactgggaa ggacggaaat
       61 agctgtcaat tctacaaaac tgagttcctt tccttcatga acacggagct ggccgccttc
      121 acgaagaacc agaaggaccc cggtgtcctt gaccgcatga tgaagaagct ggacctcaac
      181 agcgatgggc agctagattt ccaagagttt ctcaacctta ttggcggctt agctatagca
      241 tgccatgagt ccttcctcca gacttcccag aagcgtatct aaccctctcc attcccttcc
      301 agccaccaag ccatcacctc ctccactcct tcccccatcc atacctgcac tgagcccacc
      361 acacctacga cacatgcagc ccacgcctga cagggaaaat aaaacaatgt catttttttg
      421 aatgtaaaaa aaaaaaaaaa aa
//
