LOCUS       NM_001401967            5226 bp    mRNA    linear   ROD 03-APR-2024
DEFINITION  Rattus norvegicus GTPase activating protein testicular GAP1 like 11
            (Tgap1l11), mRNA.
ACCESSION   NM_001401967 XM_039103636
VERSION     NM_001401967.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 5226)
  AUTHORS   Gaudet,P., Livstone,M.S., Lewis,S.E. and Thomas,P.D.
  TITLE     Phylogenetic-based propagation of functional annotations within the
            Gene Ontology consortium
  JOURNAL   Brief Bioinform 12 (5), 449-462 (2011)
   PUBMED   21873635
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            JAXUCZ010000002.1.
            
            On Mar 3, 2022 this sequence version replaced XM_039103636.1.
            
            ##Evidence-Data-START##
            Transcript exon combination :: SRR26643293.12023.1 [ECO:0000332]
            RNAseq introns              :: mixed sample support SAMEA5760383,
                                           SAMEA5760386 [ECO:0006172]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on expression
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-149               JAXUCZ010000002.1  133022736-133022884 c
            150-206             JAXUCZ010000002.1  133022046-133022102 c
            207-386             JAXUCZ010000002.1  133020570-133020749 c
            387-536             JAXUCZ010000002.1  133018816-133018965 c
            537-578             JAXUCZ010000002.1  133017524-133017565 c
            579-660             JAXUCZ010000002.1  133016877-133016958 c
            661-738             JAXUCZ010000002.1  133012327-133012404 c
            739-802             JAXUCZ010000002.1  133010676-133010739 c
            803-985             JAXUCZ010000002.1  133009925-133010107 c
            986-1164            JAXUCZ010000002.1  133007623-133007801 c
            1165-1326           JAXUCZ010000002.1  133007054-133007215 c
            1327-1436           JAXUCZ010000002.1  133005979-133006088 c
            1437-1626           JAXUCZ010000002.1  133005401-133005590 c
            1627-1885           JAXUCZ010000002.1  133003704-133003962 c
            1886-2028           JAXUCZ010000002.1  133002633-133002775 c
            2029-2187           JAXUCZ010000002.1  133001288-133001446 c
            2188-2297           JAXUCZ010000002.1  132998784-132998893 c
            2298-2484           JAXUCZ010000002.1  132996978-132997164 c
            2485-2719           JAXUCZ010000002.1  132993479-132993713 c
            2720-2862           JAXUCZ010000002.1  132987934-132988076 c
            2863-3021           JAXUCZ010000002.1  132986527-132986685 c
            3022-3131           JAXUCZ010000002.1  132984022-132984131 c
            3132-3318           JAXUCZ010000002.1  132982709-132982895 c
            3319-3556           JAXUCZ010000002.1  132979635-132979872 c
            3557-3699           JAXUCZ010000002.1  132974301-132974443 c
            3700-3858           JAXUCZ010000002.1  132972901-132973059 c
            3859-3968           JAXUCZ010000002.1  132970332-132970441 c
            3969-4155           JAXUCZ010000002.1  132969090-132969276 c
            4156-4393           JAXUCZ010000002.1  132967495-132967732 c
            4394-5226           JAXUCZ010000002.1  132965958-132966790 c
FEATURES             Location/Qualifiers
     source          1..5226
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN"
                     /db_xref="taxon:10116"
                     /chromosome="2"
                     /map="2q26"
     gene            1..5226
                     /gene="Tgap1l11"
                     /gene_synonym="RGD1563562"
                     /note="GTPase activating protein testicular GAP1 like 11"
                     /db_xref="GeneID:295012"
                     /db_xref="RGD:1563562"
     exon            1..149
                     /gene="Tgap1l11"
                     /gene_synonym="RGD1563562"
                     /inference="alignment:Splign:2.1.0"
     exon            150..206
                     /gene="Tgap1l11"
                     /gene_synonym="RGD1563562"
                     /inference="alignment:Splign:2.1.0"
     exon            207..386
                     /gene="Tgap1l11"
                     /gene_synonym="RGD1563562"
                     /inference="alignment:Splign:2.1.0"
     CDS             244..4377
                     /gene="Tgap1l11"
                     /gene_synonym="RGD1563562"
                     /codon_start=1
                     /product="similar to GTPase activating protein testicular
                     GAP1"
                     /protein_id="NP_001388896.1"
                     /db_xref="GeneID:295012"
                     /db_xref="RGD:1563562"
                     /translation="METIESEEVGGVQQHVVCQGPVILKRGWKSNKRYLILLNNLLIV
                     SNRQKRKKFKIKHVIPLTHLWLGDEVDIFRTDNSSASRSIYLYWPMGNAVATFRSMEQ
                     TIWWYFFLQRSIREVKKQNKIDLSMQILTEDIACSDSPLYVPATNFDTGNDIISKLLP
                     MMTKHNIEDYQLWFCPGHGKAPRPLQGHEYPHDIMMINVQKNFSPQELRNFTSINSLP
                     QLLKKYLTSDAQGQFILKPRDSERILQEKNINGKTLKKPKTSIISWWRRCSVRHQDQV
                     CTSPRVNKGGKLFGRELSSICHDNKLPSAILDMLSLLKRKGPTTKGVFTVSPSVTLCQ
                     TVKDKLDSDEEVDINKQSVHVVAWIFKDFLKNIEGSLMTSKLYDEWISVTEKINEEEK
                     LAAVQSLLEKLPTANAALLGQLFQILFEVKSNSSVNGMSSYQLSCGIAPCLLFIPSSC
                     NIGGTNDIAKKISLTTFMIENARKLFGEDLVEVWYETSLFHPPGEMSSHSQNTATNTS
                     TMKEIERGLSSCPSGKTCTPGYDALPRSAVDYPPYEGIIDSEKHKSSSVYASPPVPYL
                     NLPHPKKKCYFGKSLTSIFEDKKMSGLIIDMLSIIAEKGQDSDDIFKIIPENSHYSLR
                     NRIDNEQYINWNQESVIIIASVLTDFIRSIDGSLLTSDLYEKWLSVLDEETVIEKLIA
                     IQSLLLKIPTENLILVNHLISVLAIIKDSSMNNLDSDKLALRIAPYLLRDETTRNSPF
                     LQDISRKTSLIKIMIDNYLLIFGSNKTYFKQIDKRVDGLKASTDSIKSADKSPIIKEA
                     IGGHNEKSWNDEKLNISYAALKKEDSTDSEKQQGSSVCASPPGPSINPPQTTKKCLFG
                     KALRSIFEDEKVSGLIFDMLSIIAEKGQDSDDIFKIIPENSHWSLRNKIDSEQYINWN
                     QESVIIIASVLMDFIRSIDGSLLTSDLYVNWLSVLDEGTVIEKLIAIQSLLLKIPTEN
                     LILLNHLISVLAIIKDSSMNNLDSDRLALRIAPYLLRDETTRNSSFLQDISRKMSIIQ
                     IMIDKHLLIFGNYPTYCKHVDKRPDGLKTSTYSIKSSDKSPIKEEFKVGNNWKSCDND
                     ENFNISYAALKKKGPTDSEKQQGSSVCASPPGPSINPPQTTKKFLFGKTLRSIFEDKK
                     VSGLIFDMLSIIAKKGQESDDLFKIIHENSHLSLRNRIDSEQCIDWNVESVLDIASVF
                     KDFIKNIDGSLLTSDLYEKWLSVMDEGTVAGRITVIQRLLLRIPQENFSVLNHLISVL
                     VIIKDSSMNNLNSKRLSIRIAPYAFWDRTRRGSLFGSDMSKKISLMQVMIDIYNQIFE
                     NDNKYCIDIDKRSDGLKTYADFINSEGKSPIMKQVIGDHNGKTCDVDEELDISYTIL"
     exon            387..536
                     /gene="Tgap1l11"
                     /gene_synonym="RGD1563562"
                     /inference="alignment:Splign:2.1.0"
     exon            537..578
                     /gene="Tgap1l11"
                     /gene_synonym="RGD1563562"
                     /inference="alignment:Splign:2.1.0"
     exon            579..660
                     /gene="Tgap1l11"
                     /gene_synonym="RGD1563562"
                     /inference="alignment:Splign:2.1.0"
     exon            661..738
                     /gene="Tgap1l11"
                     /gene_synonym="RGD1563562"
                     /inference="alignment:Splign:2.1.0"
     exon            739..802
                     /gene="Tgap1l11"
                     /gene_synonym="RGD1563562"
                     /inference="alignment:Splign:2.1.0"
     exon            803..985
                     /gene="Tgap1l11"
                     /gene_synonym="RGD1563562"
                     /inference="alignment:Splign:2.1.0"
     exon            986..1164
                     /gene="Tgap1l11"
                     /gene_synonym="RGD1563562"
                     /inference="alignment:Splign:2.1.0"
     exon            1165..1326
                     /gene="Tgap1l11"
                     /gene_synonym="RGD1563562"
                     /inference="alignment:Splign:2.1.0"
     exon            1327..1436
                     /gene="Tgap1l11"
                     /gene_synonym="RGD1563562"
                     /inference="alignment:Splign:2.1.0"
     exon            1437..1626
                     /gene="Tgap1l11"
                     /gene_synonym="RGD1563562"
                     /inference="alignment:Splign:2.1.0"
     exon            1627..1885
                     /gene="Tgap1l11"
                     /gene_synonym="RGD1563562"
                     /inference="alignment:Splign:2.1.0"
     exon            1886..2028
                     /gene="Tgap1l11"
                     /gene_synonym="RGD1563562"
                     /inference="alignment:Splign:2.1.0"
     exon            2029..2187
                     /gene="Tgap1l11"
                     /gene_synonym="RGD1563562"
                     /inference="alignment:Splign:2.1.0"
     exon            2188..2297
                     /gene="Tgap1l11"
                     /gene_synonym="RGD1563562"
                     /inference="alignment:Splign:2.1.0"
     exon            2298..2484
                     /gene="Tgap1l11"
                     /gene_synonym="RGD1563562"
                     /inference="alignment:Splign:2.1.0"
     exon            2485..2719
                     /gene="Tgap1l11"
                     /gene_synonym="RGD1563562"
                     /inference="alignment:Splign:2.1.0"
     exon            2720..2862
                     /gene="Tgap1l11"
                     /gene_synonym="RGD1563562"
                     /inference="alignment:Splign:2.1.0"
     exon            2863..3021
                     /gene="Tgap1l11"
                     /gene_synonym="RGD1563562"
                     /inference="alignment:Splign:2.1.0"
     exon            3022..3131
                     /gene="Tgap1l11"
                     /gene_synonym="RGD1563562"
                     /inference="alignment:Splign:2.1.0"
     exon            3132..3318
                     /gene="Tgap1l11"
                     /gene_synonym="RGD1563562"
                     /inference="alignment:Splign:2.1.0"
     exon            3319..3556
                     /gene="Tgap1l11"
                     /gene_synonym="RGD1563562"
                     /inference="alignment:Splign:2.1.0"
     exon            3557..3699
                     /gene="Tgap1l11"
                     /gene_synonym="RGD1563562"
                     /inference="alignment:Splign:2.1.0"
     exon            3700..3858
                     /gene="Tgap1l11"
                     /gene_synonym="RGD1563562"
                     /inference="alignment:Splign:2.1.0"
     exon            3859..3968
                     /gene="Tgap1l11"
                     /gene_synonym="RGD1563562"
                     /inference="alignment:Splign:2.1.0"
     exon            3969..4155
                     /gene="Tgap1l11"
                     /gene_synonym="RGD1563562"
                     /inference="alignment:Splign:2.1.0"
     exon            4156..4393
                     /gene="Tgap1l11"
                     /gene_synonym="RGD1563562"
                     /inference="alignment:Splign:2.1.0"
     exon            4394..5226
                     /gene="Tgap1l11"
                     /gene_synonym="RGD1563562"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 caatgtcctt cagcctgaca actacagaat cctccgactt cagtagctta ctgaccactg
       61 aaggcaccag gtcggtgttt agaggcagga aggcgaacga aaatttcact ttctttgata
      121 agttcttcac tgcaggctct actaaaaaga atgagcaggg cccagtaaag aaaacaacaa
      181 aacagaaagc cactccagta ttacaggtgg cgatctttat caggagaatt catttttttc
      241 aacatggaaa ctattgagtc agaagaggtg ggaggagtac agcaacacgt ggtttgccaa
      301 ggccccgtga tactcaaaag aggctggaaa agtaataaac gatatctcat cttgctcaat
      361 aatctcttga ttgtatctaa tagacagaaa aggaaaaagt ttaagataaa acatgtcatt
      421 ccattgactc acctgtggct tggtgatgaa gtggacatat tcaggacaga caacagctct
      481 gcttccaggt ccatttacct atactggcca atgggaaatg ctgtggcaac ctttcgttcc
      541 atggaacaga ctatttggtg gtacttcttt ctacaaagat ccattcgtga agtcaagaag
      601 cagaacaaaa tagatctgtc catgcagata ctcaccgagg acattgcatg ctctgacagt
      661 cctctatatg taccagcaac aaacttcgat acggggaatg acataatcag caagttacta
      721 ccaatgatga caaaacataa cattgaagat tatcagctgt ggttctgccc tggccatggg
      781 aaagctccaa gaccactcca agggcatgag tatccacatg acattatgat gataaatgtt
      841 caaaagaact tcagtccaca agaattaaga aattttacaa gtataaattc cttacctcag
      901 ctgttaaaga aatatctaac atctgatgca caggggcaat tcatcttaaa gcccagagac
      961 tcagaaagaa tcctgcagga aaaaaatata aatggaaaaa ctcttaagaa accaaaaact
     1021 tctataatat cgtggtggcg caggtgctct gtgcgccacc aggaccaagt atgcactagc
     1081 ccacgagtta ataagggagg aaaactgttt ggaagagaac tcagttccat ttgtcatgat
     1141 aacaaactgc cctcagcaat tctggacatg ctgtccctac taaaaaggaa agggcccaca
     1201 accaagggtg tctttacagt atctccgagt gtaacccttt gccaaacagt aaaggacaaa
     1261 ttggattcag acgaagaggt ggatataaac aagcaatctg tgcatgtagt ggcctggatc
     1321 tttaaggact tcctaaaaaa cattgaagga agtctgatga cttcaaagct ctatgatgaa
     1381 tggatttctg taaccgaaaa gatcaacgag gaagagaaat tagcagcagt gcagagtctt
     1441 ttagaaaaac tgccaactgc aaatgctgca ctgctggggc aactttttca aattttattt
     1501 gaagttaaaa gtaattcttc ggttaatgga atgtcttctt accaactatc ttgtgggata
     1561 gccccatgtc tcttattcat acccagctcc tgcaatattg gggggacaaa tgacattgcc
     1621 aaaaagatat ctctgacaac atttatgatt gaaaatgctc gaaaactatt cggggaggac
     1681 ttggttgagg tttggtatga aacatctcta tttcatcctc ccggagagat gtcctcacat
     1741 tcccagaata ctgcaacaaa caccagcacc atgaaggaaa tagaacgtgg actcagcagc
     1801 tgccccagtg gcaagacatg cactcctggc tatgatgcac tgccgagaag tgcagttgat
     1861 tatcctccct atgagggcat tatagattca gagaaacaca aaagcagtag tgtatatgcc
     1921 agcccaccag taccttatct aaatctacca catccaaaaa agaaatgtta ttttgggaaa
     1981 tctcttacca gtatttttga agacaaaaag atgtctggtc taataatcga tatgctgtcc
     2041 ataattgccg aaaaagggca agactcagat gacattttca aaattatacc tgaaaattca
     2101 cactattcct tgaggaatag gattgacaat gaacaataca taaattggaa tcaagaaagc
     2161 gtgataatta tagcatccgt tttaacggac tttattagaa gcattgatgg aagcttgctg
     2221 acatctgatt tatatgaaaa atggcttagc gtcctagatg aagaaactgt gattgaaaag
     2281 cttattgcca tccaaagcct tttactaaag attccaacag aaaaccttat actagtaaac
     2341 catctcattt ctgtattagc aataataaaa gattcatcca tgaataattt agacagtgac
     2401 aaattagctc tccgcatagc tccttatctg ctaagggatg agactacaag gaactcaccg
     2461 tttttgcagg atatctcaag aaagacatct cttataaaaa tcatgattga caactatctg
     2521 ttaatatttg gaagtaataa aacatatttt aaacaaattg acaaaagagt ggatggacta
     2581 aaagcctcta cagattctat aaagtctgct gacaaatcac ctattataaa agaagccata
     2641 ggtggacaca atgagaaatc ctggaatgat gaaaaattaa atatttcata tgctgctctg
     2701 aaaaaggaag attctacaga ttcagagaaa caacaaggca gtagtgtatg tgccagccca
     2761 ccaggacctt ccataaatcc accacaaacg acaaagaaat gcttgtttgg caaagctctt
     2821 agaagtattt ttgaagacga aaaggtgtct ggtctaatat ttgatatgtt gtccataatt
     2881 gccgaaaaag ggcaagactc agatgacatc ttcaagatta tacctgaaaa ttcacactgg
     2941 tccttgagga ataagattga cagtgaacaa tacataaatt ggaatcaaga aagtgtaata
     3001 attatagcat ccgttttaat ggactttatt agaagcattg atggaagctt gctgacatct
     3061 gatttatatg taaattggct tagcgtccta gatgaaggaa ctgtgattga aaagcttatt
     3121 gccatccaaa gtcttttact aaagatccca acagaaaacc ttatactact aaaccatctc
     3181 atttctgtat tagcaataat aaaagattca tccatgaata atttagacag tgacagatta
     3241 gctctccgca tagctcctta tctgctaagg gatgagacta caaggaactc atcgtttttg
     3301 caggacatct caagaaagat gtctattata caaattatga ttgacaaaca tctgctaata
     3361 tttggaaatt atccaacata ttgtaaacac gttgacaaaa gacctgatgg attaaagacc
     3421 tctacatatt ccataaagtc ttctgacaaa tcacctatta aggaagaatt caaagttgga
     3481 aacaattgga aatcctgtga taatgatgaa aatttcaata tttcatatgc tgctctgaaa
     3541 aagaaaggtc ctacagattc agagaaacaa caaggcagta gtgtatgtgc cagcccacca
     3601 ggaccttcca taaatccacc acaaacaaca aagaaattct tgtttggaaa aactcttagg
     3661 agtatttttg aagacaaaaa ggtgtctggt ctaatatttg atatgttgtc cataattgcc
     3721 aaaaaagggc aagaatcaga tgatttattc aaaattatac atgaaaattc acacttgtcc
     3781 ttaaggaata ggattgacag tgaacaatgc attgactgga atgtagaaag cgtcctagat
     3841 atagcatccg ttttcaagga ctttattaaa aacatagatg gaagcttgct gacatctgat
     3901 ttatatgaaa agtggcttag cgtcatggat gaagggactg tggctggaag aattactgtc
     3961 atccaaagac ttttactaag gatcccacaa gaaaatttta gtgtactaaa ccatctcatt
     4021 tctgtattag taataatcaa agactcatcc atgaataatt taaacagtaa gagattatct
     4081 atccgcatag ctccttatgc gttttgggat cggactagaa ggggttcatt gtttgggagt
     4141 gatatgtcaa aaaagatatc tcttatgcaa gtcatgattg acatttataa tcaaatattt
     4201 gaaaatgata ataaatattg tatcgacatt gacaaaaggt ctgatggact aaagacatat
     4261 gcagatttca taaattctga aggaaaatcg cctattatga aacaagtcat aggtgaccac
     4321 aatgggaaaa cctgtgatgt tgatgaagaa ttagatatct cctatactat cctgtaagag
     4381 gaaggtccta tagcaggaca gagcagaaca accaccacat ataagtggta gaggatgact
     4441 gaagacattc taaggtcatt ctattttcat gttcctgtct accgcccact aaatcataac
     4501 agaagatatt attacaagat cctacttctg ctttatattt caccatatta gttacaaata
     4561 gtttccctaa ttattcttat tatgctgtag tttatatatt gtttgatatt ataataaatt
     4621 ttattaaatt gtgttattgc ttacactaca atgtgccttg ttcatgattc tctatagtct
     4681 ttggaaaatg gcatttttca gtctcagcct ctatagccca cttctagtac tagttttcac
     4741 acctcagtta ccaaagtatg gccagaagct aatgacatta aaaatctctt agagttatgc
     4801 ctcgaattct gtgccataaa aaactaaata atattccagt aacaataaaa attaatcata
     4861 acacttgata gaactagatg tggatcatgg tttttagaat acacaaaatg acctgaaagc
     4921 ataagtgctt taggaattga gatacagcct ttgtgacatg aatttgggtc ataaaaacat
     4981 acattaaaaa aacaagcaaa actgggtatt gtagcaccag catctctaga ccagaagctt
     5041 ctacctggat ggaaatcaga gttggcgaca gaaattaaca gaaggtattt gaccagattt
     5101 tcctgacatg ttgttcagta atgataaaaa gagacattgt gaccaagggg cgggggaatg
     5161 agagagcgag agcgagagcg agagcgagag cgagagcgag agcgagagcg agagcgagag
     5221 cgagag
//
