LOCUS       XM_039100533             676 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus similar to RIKEN cDNA 1700001F22
            (RGD1563232), mRNA.
ACCESSION   XM_039100533
VERSION     XM_039100533.1
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051356.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..676
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="X"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..676
                     /gene="RGD1563232"
                     /note="similar to RIKEN cDNA 1700001F22; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 100% coverage of the annotated genomic feature by
                     RNAseq alignments"
                     /db_xref="GeneID:302389"
                     /db_xref="RGD:1563232"
     CDS             150..596
                     /gene="RGD1563232"
                     /codon_start=1
                     /product="high mobility group protein B4-like"
                     /protein_id="XP_038956461.1"
                     /db_xref="GeneID:302389"
                     /db_xref="RGD:1563232"
                     /translation="MMDFKNQMKEQQPNTCYDFTEFSRKCSEKWRSISKKEKKKYEAL
                     AKRDKDRYQHEMRNYTGPRRERRRRDANAPRKPPSSFLLFSMDHFDQIKEEHPNWTVA
                     QVAKAAGRMWSRSAEVDKIPYEEKAAILWAKYLEEQEAYYHQCQRG"
ORIGIN      
        1 cacatggagg gcactatcta ggttgctcat gctgtgaaaa gactaattgc tgctatccaa
       61 tcagcaggat cggaattcat gcttttataa acatgggaaa agaaagcaaa ctgagaccaa
      121 aggtgaacgt ctctccttag gtccatttta tgatggactt caaaaatcaa atgaaggagc
      181 aacagccaaa cacctgttat gactttaccg aattttctag aaagtgttct gaaaagtgga
      241 ggtcgatctc gaagaaggaa aagaagaagt atgaagccct agccaagcgc gacaaagatc
      301 ggtaccaaca tgaaatgaga aactacaccg gaccaagaag ggagagaaga aggagggatg
      361 cgaatgcacc gcggaagccc ccatcctcat tcctgctctt ctccatggat cactttgacc
      421 agataaaaga agaacaccca aattggactg tggcgcaggt ggccaaggct gccggaagga
      481 tgtggtccag gtctgcggaa gtggacaaaa tcccctatga ggagaaggct gctattctgt
      541 gggcaaagta ccttgaagag caggaggcct actaccacca atgccagcgc gggtagtaaa
      601 acttctaggg atggggcaaa cccaatctga aacaatagac ctcattcaac tggcaaaaaa
      661 aacaaaaaac aaaaaa
//
