LOCUS       XM_039087853             504 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus similar to 60S ribosomal protein L29
            (P23) (RGD1563134), mRNA.
ACCESSION   XM_039087853
VERSION     XM_039087853.1
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051345.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Feb 22, 2024 this sequence was replaced by
            XM_039087853.2.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 5% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..504
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="10"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..504
                     /gene="RGD1563134"
                     /note="similar to 60S ribosomal protein L29 (P23); Derived
                     by automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 4 Proteins, and 55% coverage of the annotated genomic
                     feature by RNAseq alignments"
                     /db_xref="GeneID:287518"
                     /db_xref="RGD:1563134"
     CDS             1..504
                     /gene="RGD1563134"
                     /codon_start=1
                     /product="60S ribosomal protein L29-like"
                     /protein_id="XP_038943781.1"
                     /db_xref="GeneID:287518"
                     /db_xref="RGD:1563134"
                     /translation="MGISIAVAYHADIAKSKNHTSHNQFCKWHRNVIKKPHSQIYKSL
                     KGVDPKFLRNMCFAKKHKKGLKKMQSNNAKAVSARAEAIKAHVKPQAVKPKMPKGSSH
                     KLSRLAFILHPKLGKKIQSYMAKGHRLCQSKPKVQTKAEAKAPGKAQASAPAQAPKGA
                     QAPVKAP"
ORIGIN      
        1 atgggcatct caatcgctgt ggcttaccat gcagacatag ccaagtccaa gaaccatacc
       61 tcacacaacc agttctgcaa atggcacaga aatgtcatta agaaacccca ctcacaaata
      121 tacaaatctc ttaagggggt cgaccccaag tttctgagga acatgtgttt tgccaagaag
      181 cacaagaaag gcctgaagaa gatgcagtcc aacaatgcca aggcagtgag tgcacgagca
      241 gaggccatca aggcccatgt gaagcctcag gctgtcaagc ccaagatgcc aaagggctcc
      301 agccacaaac tcagccgtct ggcttttatc cttcacccca agcttgggaa gaagattcaa
      361 agctacatgg ccaagggtca taggctctgc caatcaaagc ccaaggttca aaccaaggca
      421 gaggccaaag ctccaggtaa ggcccaggct tcagctccag cccaggctcc caagggtgcc
      481 caggcccctg tgaaggcccc atag
//
