LOCUS       XM_039080068             653 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus similar to 40S ribosomal protein S20
            (RGD1563124), mRNA.
ACCESSION   XM_039080068
VERSION     XM_039080068.1
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051342.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Feb 22, 2024 this sequence was replaced by
            XM_039080068.2.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..653
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="7"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..653
                     /gene="RGD1563124"
                     /note="similar to 40S ribosomal protein S20; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 1 long SRA read, 24 Proteins, and 96% coverage of the
                     annotated genomic feature by RNAseq alignments"
                     /db_xref="GeneID:500817"
                     /db_xref="RGD:1563124"
     CDS             253..624
                     /gene="RGD1563124"
                     /codon_start=1
                     /product="40S ribosomal protein S20-like"
                     /protein_id="XP_038935996.1"
                     /db_xref="GeneID:500817"
                     /db_xref="RGD:1563124"
                     /translation="MAFKDTRKTPVEPEGAIHRIRITLTSRNVKSLEKVCADLIRGAK
                     EKNLKEKGPVRMPTKTLRITTRKTPCGEGSKTWDRFQMRIHKRLIDLHSPSEIVKQIT
                     SISIEPGVEVEVTIADAKSTV"
ORIGIN      
        1 ctcctgatcc tcctgcatct tccctccaaa tgttgtgttt acaggtatgc cctatcatac
       61 ttacctatgt tactatagct ctgatggaac ctagaaggag tttcttgtga cccctcccct
      121 ctttaagagg aaatgtttgg gagacctgtg gtgcgtgctg tgctgtggag ccttgtccag
      181 tctgctctgt cctgactcac tgctgttcgc tcctgctgag gaacaagtcg gtcaggaagc
      241 cgcgcctcag ccatggcatt taaagatacc aggaagactc ccgtggagcc cgaaggggcg
      301 attcaccgga ttcgaatcac gctcaccagc cgcaacgtga agtcgctgga gaaggtttgt
      361 gcggacttga tcagaggtgc aaaggagaag aatctgaaag agaaaggacc ggtgcgcatg
      421 cctaccaaga cactgagaat cactaccaga aaaacacctt gcggtgaagg ttccaagacg
      481 tgggatcgtt tccagatgag aatccacaag cgactcattg acttacacag tccttctgag
      541 attgttaagc agattacttc catcagtatt gagcctggag tggaggtcga agtcaccatt
      601 gcagatgcta agtcaactgt ttaaataaat tgacttaatt gttaaaaaaa aaa
//
