LOCUS       XM_039080203            1538 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus similar to KIAA0089 (RGD1563100),
            transcript variant X1, mRNA.
ACCESSION   XM_039080203
VERSION     XM_039080203.1
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051342.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Feb 22, 2024 this sequence was replaced by
            XM_039080203.2.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1538
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="7"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..1538
                     /gene="RGD1563100"
                     /note="similar to KIAA0089; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 2
                     ESTs, 8 Proteins, and 100% coverage of the annotated
                     genomic feature by RNAseq alignments, including 3 samples
                     with support for all annotated introns"
                     /db_xref="GeneID:299964"
                     /db_xref="RGD:1563100"
     CDS             312..1367
                     /gene="RGD1563100"
                     /codon_start=1
                     /product="glycerol-3-phosphate dehydrogenase 1-like
                     protein"
                     /protein_id="XP_038936131.1"
                     /db_xref="GeneID:299964"
                     /db_xref="RGD:1563100"
                     /translation="MGATTLRVCIVGFWSWGSAIAKIIGTNVKNQQKFASTVKMWVSE
                     EAVNGRKLTDIINHYHENVKYLPGHKLPENVVAVANLSEAVQDADLLVFTTPHQFIHK
                     ICNEITGRVPKKALGIIHMESIDEGPRGLMLISDIIREKIGMDVSVLMGANTAREVAA
                     GEFCETTIGSKVIQNGILFKELLQTSNFCITVVDDADAVELCGALKHIVAMGTNFCNG
                     LHCGNNSKAAVLRLGLVEMITFTRIFCKSQVSTTTFLESCGFANPITICYRGSDCKEA
                     KTFPRIGKTMGNLQKEVLNGQTLQGLKTSALVYQFLKQKGLLAKFPLFVTVYRICYEG
                     RPSTEILTCLQNHPAHM"
ORIGIN      
        1 tctgtggcta atagttcagc agggacacgg atccatgagt taccccaccc ccatcctaat
       61 tcctcaacgg gccacctttt gcaagtccag agaaggtaac catagcgtct ctgatgaacc
      121 catacttaat taacagttat aggaagctat cagagagcaa agtcctggag aaagtgcttt
      181 caaaatgtat gacattctca aataatcaat aaataaatct aatgtatcat acatcttcct
      241 agggcaaagt ctcagagaaa gtgcttttaa aatgtacttt taggtgtgtg ttgcagttgt
      301 ttggttcagt catgggtgct acaaccctga gagtgtgcat tgtaggcttc tggagttggg
      361 gatcagctat tgcaaaaata attgggacta atgtcaagaa ccagcagaag ttcgcctcca
      421 cagtcaagat gtgggtctct gaagaagcag tgaacgggag gaaactgaca gacatcataa
      481 atcactacca tgaaaacgtc aaatatcttc caggacataa gctgccagaa aatgtggttg
      541 ctgtcgcaaa tctcagtgag gcagtgcagg atgcagatct actggtgttc accaccccac
      601 accagttcat tcacaaaatc tgtaatgaga ttactggcag ggtgcccaag aaggctcttg
      661 gcatcattca catggagagc atagatgagg gcccgagagg actgatgctc atttccgaca
      721 tcattcgaga gaagataggg atggacgtta gcgtgctgat gggggctaat acagccaggg
      781 aggtggctgc tggggagttt tgtgagacta ccattggtag caaagttatt cagaatggca
      841 ttctcttcaa agagctgctt cagacctcca acttctgcat cactgtggtg gatgatgctg
      901 atgccgtgga actctgcgga gcactaaaac acatcgttgc catgggaacc aacttctgca
      961 atggcctcca ctgcgggaac aacagcaagg cagctgtcct ccgccttggc cttgtagaaa
     1021 tgatcacttt caccaggatc ttctgcaaga gccaggtgtc cacgaccacc ttccttgaga
     1081 gctgtggctt tgccaacccc atcactatct gctacagagg gagtgactgc aaggaggcta
     1141 agaccttccc caggattggg aagactatgg gaaacctaca aaaggaagtg ctgaatggtc
     1201 agacacttca aggacttaag acctctgctt tagtgtacca attcctcaag cagaaggggc
     1261 ttctagctaa gtttccatta tttgtaacag tgtatcggat ctgttatgaa ggcagacctt
     1321 ccacagagat actaacctgc ctccagaacc atcctgcaca catgtgaatg gcattaaaca
     1381 atgactggga caactgtctt acctacagga ggcggagggt agaaagggag gttacatgga
     1441 cagacagatg gactgaagaa cttggaactt aggagaactt gacaatgaga ttttctatgt
     1501 gactataatc ttaaatacca aagatatgtg aattgcta
//
