LOCUS       NM_001107981            2601 bp    mRNA    linear   ROD 24-JUN-2024
DEFINITION  Rattus norvegicus similar to human chromosome 1 open reading frame
            216 (C5h1orf216), mRNA.
ACCESSION   NM_001107981 XM_001058394 XM_006238869 XM_233525
VERSION     NM_001107981.3
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            JAXUCZ010000005.1.
            
            On Apr 3, 2023 this sequence version replaced NM_001107981.2.
            
            ##Evidence-Data-START##
            Transcript exon combination :: SRR26360190.2986474.1,
                                           SRR26643292.23038.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMEA5760383, SAMEA5760386
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on expression
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-172               JAXUCZ010000005.1  144185081-144185252
            173-2601            JAXUCZ010000005.1  144187333-144189761
FEATURES             Location/Qualifiers
     source          1..2601
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN"
                     /db_xref="taxon:10116"
                     /chromosome="5"
                     /map="5q36"
     gene            1..2601
                     /gene="C5h1orf216"
                     /gene_synonym="RGD1563072"
                     /note="similar to human chromosome 1 open reading frame
                     216"
                     /db_xref="GeneID:313595"
                     /db_xref="RGD:1563072"
     exon            1..172
                     /gene="C5h1orf216"
                     /gene_synonym="RGD1563072"
                     /inference="alignment:Splign:2.1.0"
     exon            173..2601
                     /gene="C5h1orf216"
                     /gene_synonym="RGD1563072"
                     /inference="alignment:Splign:2.1.0"
     CDS             178..858
                     /gene="C5h1orf216"
                     /gene_synonym="RGD1563072"
                     /codon_start=1
                     /product="UPF0500 protein C1orf216 homolog"
                     /protein_id="NP_001101451.1"
                     /db_xref="GeneID:313595"
                     /db_xref="RGD:1563072"
                     /translation="MFAAIQPGLAEGAQYLGSLPPGVCHPDLQPDSNSNFVESAKDAN
                     KNWHGVDPILIRSSSESPSDNRVFQATGLPEAGVRSPPEGAEIPGAEPEKSSDASSVC
                     SPLEDIGYASSSLSISSFSSSAEAGCSTPRGPSPLDPLLPSVAQAVQQLQAQERYKEQ
                     EKEKHHVHLVMYRRLALLQWIRALQHQLVDQQARLQESFDTILDNRKELIRCLQHREG
                     PCRHQDQG"
ORIGIN      
        1 gcagacgccg ctggactccg cagtccgggc tggggctggg acggctgtgc caggaccagg
       61 cagccgcgcc accgcgcgtg cacgcgcagg tccaggaccc acccccagcc tctacagcga
      121 gcaggccccg aggaaccata gcaaaccccg caggagcggg cgcctctagg cctccagatg
      181 tttgctgcta tccagccagg actagcagag ggggcccagt acctggggag cctgcctcct
      241 ggagtatgtc acccggacct ccaaccagac agtaattcca acttcgtgga gagcgctaag
      301 gatgctaata agaactggca tggtgtggat cctattctga taagaagctc ctctgagtcg
      361 ccctctgata accgggtctt ccaagccact gggctccctg aggccggagt ccgcagtccc
      421 ccggagggtg cagagatccc tggtgctgag ccagagaagt cgagtgatgc cagcagcgtc
      481 tgctctcctc tggaggacat cggctatgcc agcagttcct tgagcatcag cagctttagc
      541 agcagtgcag aagctggctg tagcacccct cgaggtccaa gccccctgga tccccttctg
      601 ccctctgtgg cccaggccgt gcagcagctg caggctcagg agcgctacaa ggaacaggag
      661 aaggagaaac accatgtgca tttggtgatg taccgtcgct tggcgctgct ccagtggatc
      721 cgggctctac agcaccagtt ggttgaccag caggcccgac tgcaggagag ctttgacacc
      781 atcctagaca accggaagga acttatccgc tgtctgcaac acagggaagg accttgcagg
      841 caccaggacc agggctgagg gtgggcacaa gtatgttggc aggcttctgt gtggttatgc
      901 acaagtaagt atgtattagt tggcatgtgt gtaagtcagc ataagtgaat atatatatat
      961 gctaacatgt aagcaggtat gtaaggcatg tgtgaacgaa cttgtgtgtg tgttacatgt
     1021 tgcatgtgtg tttatgtgtg catatgtggc taggtactca ggaatgtgta tatatatatc
     1081 tattcccaaa tgtagaggca aaagataggt atgcatgtgt tatcagttta aacgtgcagg
     1141 cttgtgttgg ggtgtgagtg accctctgtg tgttgagatt tacacgttcc agttctggcc
     1201 taagaagcac gtgctaggaa cgtgtgtatt tgcagagact taagagcagg tgtgtgtaaa
     1261 tagacgttca atcgcacctg cagggcatcc atccatcctg tgttcccaaa gtctacccca
     1321 gccttatccg ctactgagtc tcacagcttc ctggagagaa gcctacgtcg ctgtcactta
     1381 tctgagggct ttgggtgatc tgttctccta gtgtttccca ggctctcttc cctgtccctt
     1441 cccctcaggc cttgctctaa gacagctgtc cctaatgttg gctttttcct aagagttttt
     1501 atttgggggt ggttactttt tgtttgtttt acttattata gtacaaagga ttgagcccag
     1561 agccctgcgc acgctaagca actgtcctag cactgagctg cacacccagt cccagatcac
     1621 aggtttattg gctttccctg tgcacatttt tggcatctgg ccaggacagt ttgagggagg
     1681 caactggcgt agtggtggag gctgtggcag gggtggggga gtggagataa agaagttcaa
     1741 ggacagctag gaccacaaat agaaaccaaa acgaaagaaa gaaagaaaga aagaaagaaa
     1801 gaaagaaaga aagaaggaaa gaaagaaagg gtcattttga accctgtctt cggctctgta
     1861 ggggttggga gtggaagaaa atgtctctgg tagaactctg tgaagaacag gagaattcca
     1921 aaacacccca tcctgctcca ctgggaggag gggctgaaag ccatactgat ttaagcctgt
     1981 tgactgggac tgtgcgtata agcaagcagg tcatagacca gatgggccaa ggccgtgggg
     2041 agttgggggt cctgccttct cttcaccgct ccctcactct gcctgcctgg cgttagcagc
     2101 agtgaatgtg cagttggctt ggacaatgtt tctgaatcag actgtccaga gaatagagct
     2161 cagcttccca ggcggtcaga ggacagggtc agcccagtct ccagaagctc ttaggatatg
     2221 tgtcccctcg gaatggggat tggcaggccc tagggaagct tcatgcggtg gagataaatg
     2281 tgtatggggg tgggtcaata gttaaggtcg cagagctctt tgttttgttt ctgggttccg
     2341 aagtaatgca ggatcctagt gggtgaaaca gtgactcgaa ggaggaacag cagcaggtga
     2401 cagggacagc actgatgctg tgtctggccc tcagtctccc cacctgtaaa gtggggactc
     2461 ttccgcactc tctccaaaca gtcccatcct gagtgggtgg gtgaaatgtg ggccctgagg
     2521 acttttatac tgcttgcacg ttgaatgtga acctggcctc tggaccaatc cagtataaat
     2581 aaactaaggc gagaaattaa a
//
