LOCUS       NM_001166267            1346 bp    mRNA    linear   ROD 07-OCT-2023
DEFINITION  Rattus norvegicus similar to human chromosome 6 open reading frame
            15 (C20h6orf15), mRNA.
ACCESSION   NM_001166267 XM_001073084
VERSION     NM_001166267.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 1346)
  AUTHORS   Manabe R, Tsutsui K, Yamada T, Kimura M, Nakano I, Shimono C,
            Sanzen N, Furutani Y, Fukuda T, Oguri Y, Shimamoto K, Kiyozumi D,
            Sato Y, Sado Y, Senoo H, Yamashina S, Fukuda S, Kawai J, Sugiura N,
            Kimata K, Hayashizaki Y and Sekiguchi K.
  TITLE     Transcriptome-based systematic identification of extracellular
            matrix proteins
  JOURNAL   Proc Natl Acad Sci U S A 105 (35), 12849-12854 (2008)
   PUBMED   18757743
REFERENCE   2  (bases 1 to 1346)
  AUTHORS   Hurt P, Walter L, Sudbrak R, Klages S, Muller I, Shiina T, Inoko H,
            Lehrach H, Gunther E, Reinhardt R and Himmelbauer H.
  TITLE     The genomic sequence and comparative analysis of the rat major
            histocompatibility complex
  JOURNAL   Genome Res 14 (4), 631-639 (2004)
   PUBMED   15060004
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from BX883047.1.
            
            On Oct 16, 2009 this sequence version replaced XM_001073084.1.
            
            Sequence Note: The RefSeq transcript and protein were derived from
            genomic sequence to make the sequence consistent with the reference
            genome assembly. The genomic coordinates used for the transcript
            record were based on alignments.
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on single protein-coding transcript
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-115               BX883047.1         150456-150570
            116-1346            BX883047.1         150782-152012
FEATURES             Location/Qualifiers
     source          1..1346
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN"
                     /db_xref="taxon:10116"
                     /chromosome="20"
                     /map="20p12"
     gene            1..1346
                     /gene="C20h6orf15"
                     /gene_synonym="RGD1562885; Stg"
                     /note="similar to human chromosome 6 open reading frame
                     15"
                     /db_xref="GeneID:502412"
                     /db_xref="RGD:1562885"
     exon            1..115
                     /gene="C20h6orf15"
                     /gene_synonym="RGD1562885; Stg"
                     /inference="alignment:Splign:2.1.0"
     CDS             49..1203
                     /gene="C20h6orf15"
                     /gene_synonym="RGD1562885; Stg"
                     /note="uncharacterized protein C6orf15 homolog"
                     /codon_start=1
                     /product="uncharacterized protein C6orf15 homolog
                     precursor"
                     /protein_id="NP_001159739.1"
                     /db_xref="GeneID:502412"
                     /db_xref="RGD:1562885"
                     /translation="MQSLVGGSQAPLGLLLICLGLPGLFARSIGAPEEKVSPHSGQPS
                     FTSLLNSGQPQPKPDSVNNELPGVLPRLSESPQDGSLPKGGSEVPGGPPFWGRPPFWG
                     PPPMESWPSEDPQQGMFADAEDHLEPVLPEALSYLSRDSPLPEASSAHVKQPSPEASY
                     PLDTEPEPQPGSRSLETEAEAFARSPFWFLVHKLLPGVSGRILNPGTSWGSGGAGTEW
                     GTRPMPYPSGIWGSNGLVSGTSLVSNGRYPAGIWGGNGRYPVGIWGGSGRYPAGIWGG
                     SGRYPAGIWGGNGRYPVGSWGGNGRYPVGSWGGNGRYPVGNWGGNGQYPAGSWGSNGR
                     YPAGSWGPNCQYPAGSRGPNCQYPPGSWGAKGQKRLPPGVKPPGSSGGSP"
     exon            116..1346
                     /gene="C20h6orf15"
                     /gene_synonym="RGD1562885; Stg"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 gataaagcct gctatctcgg cgcccggcag aagccagagc tgagcaagat gcagagcctc
       61 gtgggtggga gccaggctcc cctaggcctg ctcctgatct gtctgggtct gccaggcctc
      121 tttgcacgga gcattggggc accagaggag aaagtctccc cacattcggg acaaccttcc
      181 ttcaccagcc tcctcaactc tggacagcct cagcccaagc cagactctgt gaataatgag
      241 ttaccagggg ttcttccgag gctcagcgaa tctccacaag atggatctct acccaagggt
      301 ggctctgagg tgcctggtgg gcctcccttc tgggggcggc ctcccttctg ggggccgcct
      361 cccatggagt cctggccctc agaggaccct cagcaaggga tgtttgctga tgccgaggac
      421 cacttggagc cagttctgcc agaagccctg tcataccttt ccagagacag tcctctgcct
      481 gaggcttcct ctgcgcatgt caagcaacct tcaccagagg cttcctaccc cctggacaca
      541 gagcctgaac cacagcctgg ttccagatcg ctggaaactg aggcagaagc cttcgcccgg
      601 agcccattct ggtttcttgt ccacaaactt ctgcctggtg tatccgggag gatcctaaat
      661 cctggaacat cctggggaag tggaggggct ggaactgagt ggggaacaag gcccatgccg
      721 tatccttctg gaatatgggg tagcaatggt ctagtatcag gcactagctt ggtgagtaat
      781 ggtcgatatc cagcaggcat ctgggggggt aatggtcggt acccggtagg catctggggg
      841 ggtagtggtc gatacccagc aggcatctgg gggggtagtg gtcgataccc agcaggcatc
      901 tgggggggta atggtcggta cccagtaggc agctgggggg gtaatggtcg gtacccagta
      961 ggcagctggg ggggtaatgg tcggtatccg gtaggcaact gggggggtaa tggtcagtac
     1021 ccagcaggca gctggggcag taatggtcgg tacccagcag gtagctgggg gcccaactgc
     1081 cagtacccag caggcagccg ggggcccaat tgtcagtatc caccagggag ctggggagct
     1141 aagggtcaga aacggcttcc cccaggagtc aaacctcctg gctcttctgg gggctctccc
     1201 taatgttcca actggtttgg agccaggtta gagatcagca gaagcatgct cagtccggcc
     1261 tagtcacatg gttttccctt ctctttccat ttttaaagcc tctgttgacc tgagctagtc
     1321 accaataaac acaagcagtt cttgaa
//
