LOCUS       XM_039100520             645 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus similar to SNARE protein Ykt6
            (RGD1562775), mRNA.
ACCESSION   XM_039100520
VERSION     XM_039100520.1
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051356.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Feb 22, 2024 this sequence was replaced by
            XM_039100520.2.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..645
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="X"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..645
                     /gene="RGD1562775"
                     /note="similar to SNARE protein Ykt6; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 1
                     Protein, and 100% coverage of the annotated genomic
                     feature by RNAseq alignments"
                     /db_xref="GeneID:503440"
                     /db_xref="RGD:1562775"
     CDS             46..390
                     /gene="RGD1562775"
                     /codon_start=1
                     /product="synaptobrevin homolog YKT6-like"
                     /protein_id="XP_038956448.1"
                     /db_xref="GeneID:503440"
                     /db_xref="RGD:1562775"
                     /translation="MFKGVYNMSSFSVFQRFSVQEFMTFTSQLVAEYSAKGSRDSVEE
                     QVYFCHVYIRSDGLAGVVIANNVYLSRVAFTLLEKVLDEFFKRVDRIDWPVGSPATRY
                     QNCQEADPISTS"
ORIGIN      
        1 agctgtagag cctgtgtcct ttacaagagc aaaccaaaag cagtgatgtt caaaggtgtg
       61 tacaacatgt cttccttcag tgtcttccag aggttcagtg ttcaggaatt catgaccttt
      121 acaagtcaac tggttgcgga atactcagca aaaggcagca gagattctgt cgaagaacaa
      181 gtgtattttt gccatgtcta catccggagt gatggtcttg caggtgtggt cattgctaac
      241 aatgtatacc tttccagagt ggcctttact ttgctggaga aggtactaga tgaattcttc
      301 aagcgggttg atagaataga ctggccagta ggatcccctg ctacaagata ccagaactgc
      361 caagaagctg atcccataag tacaagctga actgacaaga ccaaaatcat tcggcataac
      421 catggagtct ttgttagagt gaggtgagaa gtttgatgac ttggtatcca aattaggagt
      481 actgggaaca cagtcgatag ccttctacag aattgcctgg aaacaaaact catgctgtac
      541 aataatgtga agtagcccac agagtcaggg gctggatcat catgtcacat caacccctgg
      601 agacagatga tatcctagaa gagcatctgg atccaggcag agtgg
//
