LOCUS       XM_006248117             534 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus similar to RIKEN cDNA 2310057N15
            (RGD1562771), mRNA.
ACCESSION   XM_006248117
VERSION     XM_006248117.2
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051346.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Feb 22, 2024 this sequence was replaced by
            XM_006248117.3.
            
            On Jan 21, 2021 this sequence version replaced XM_006248117.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 8% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..534
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="11"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..534
                     /gene="RGD1562771"
                     /note="similar to RIKEN cDNA 2310057N15; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 4 Proteins, and 34% coverage of the annotated genomic
                     feature by RNAseq alignments"
                     /db_xref="GeneID:501767"
                     /db_xref="RGD:1562771"
     CDS             16..534
                     /gene="RGD1562771"
                     /codon_start=1
                     /product="keratin-associated protein 13-1-like"
                     /protein_id="XP_006248179.1"
                     /db_xref="GeneID:501767"
                     /db_xref="RGD:1562771"
                     /translation="MSCNCHSDNLSTSFRCCLPISDSSCCSSCSSNLVYTTTSCSPST
                     CELSSSLHSDCQETCIEPSICQRSCVASSPCQMPCYYPRSSTACSPCQGTYDGSMGVG
                     SNSCCSMDYGFRRCYIMGRGSSGFEFLNYGVSGFPLLSYGYRFCYPTHLAASICQPYY
                     ETCGNILYGFNG"
ORIGIN      
        1 acatctcctc tcaacatgag ctgtaactgc cactcagata acttgtctac ctcctttagg
       61 tgctgcctgc ccatctcaga ttcctcctgt tgttcctctt gctcaagcaa cctggtctac
      121 accactacca gctgctctcc cagcacctgt gagctgagct cctctctgca cagtgactgt
      181 caggagacct gtattgagcc ctccatctgc cagaggtcct gtgtggcgtc cagcccctgc
      241 cagatgccct gctactaccc caggagctcc acagcctgca gtccctgcca ggggacatat
      301 gacggctcta tgggcgttgg gtccaacagc tgctgctcca tggattatgg atttagaaga
      361 tgctacatca tgggccgtgg atccagtggc tttgaatttc tgaattatgg agtctctggc
      421 ttccctttac tgagttatgg gtacagattc tgctacccaa cccacctggc tgctagtatc
      481 tgccaaccat actatgaaac ctgtggtaat attctctatg gattcaatgg ctaa
//
