LOCUS       XM_039080202            1486 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus similar to STELLA (RGD1562739), mRNA.
ACCESSION   XM_039080202
VERSION     XM_039080202.1
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051342.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Feb 22, 2024 this sequence was replaced by
            XM_039080202.2.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1486
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="7"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..1486
                     /gene="RGD1562739"
                     /note="similar to STELLA; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 2
                     ESTs, 2 Proteins, and 100% coverage of the annotated
                     genomic feature by RNAseq alignments"
                     /db_xref="GeneID:500875"
                     /db_xref="RGD:1562739"
     CDS             372..848
                     /gene="RGD1562739"
                     /codon_start=1
                     /product="developmental pluripotency-associated protein
                     3-like"
                     /protein_id="XP_038936130.1"
                     /db_xref="GeneID:500875"
                     /db_xref="RGD:1562739"
                     /translation="MDEPSEKVDPVVNPETQMNDGSQRKGEEDSPDDSEILQPETLVK
                     VMKKLTLNPSAKPTKYHRCQRVRLRIKSQPVENRSERIMREVQSAFPKRRVRTLLLVL
                     KDPIARMRRFVRTEQRQRQLEGNERRDEPFRCLCTFCHYQRWDPSENAKIGQNQKN"
ORIGIN      
        1 ctcacaacca catggtggct cacaaccatc tgaaatggga tctgatgccc tcttccggtg
       61 tgtctgaaga caaacagtgt gcttatatat aataaataaa tcttttttaa gaaaagaatt
      121 tcatatgtga tagctcagat aaaatgtata ggctaacgta ttttaaaggg atatctaaca
      181 attattttta aaagagggaa aagtaaagaa aaattctaac tagaatatga ttcttgaaat
      241 gatttagaat tgtatttaaa acactaactc tactcttcag tctctgctat gtggggctag
      301 agcttaggtc tttctaaaga ttagctagca attttgttcg gagctagctt ttgaggcttc
      361 tgcccactgc catggatgag ccatccgaga aagtcgaccc agttgtgaac ccagaaactc
      421 agatgaatga tggatctcag aggaaaggtg aagaggactc accggatgat tcagaaatcc
      481 tacaaccaga aacactagta aaggtcatga aaaagctaac cctgaacccc agtgccaagc
      541 cgacaaaata tcatcgttgt caaagggttc gtctccggat taagagccag cctgtggaga
      601 acagaagtga aagaatcatg agggaagttc aaagcgcctt tcccaagaga agggtccgca
      661 cactgttgtt ggtgctgaaa gaccccatag caaggatgag aagatttgtt cggactgagc
      721 agagacaaag acagcttgaa ggaaatgaga gacgagatga gccattcaga tgtctctgca
      781 ctttctgcca ttatcagaga tgggatcctt ctgagaatgc taaaatcggg cagaaccaga
      841 agaattaggg cagtttgaat tgtacactgt ccttgccgtt aacggtgcca tgcagcagat
      901 gtgaaagctg tttttttgtt tgttaagatt aaacttttct tggtgctggg gaaatctctt
      961 ctacttgcta acctttaaat tatataggat gtgtgacatt tggattcatg ggaatgacag
     1021 atttacccaa gaattgagca tgagtcaaag cccggtagtt tgatttagaa ggtaattgga
     1081 atagatcttt tattttagat tttctagttt acagagaaat ttgtaataaa ggaaaatttg
     1141 ttatctttaa taaatacaca gaacagatta gaacgagcca ttggagatgg gggacttgtt
     1201 ttttacaggt gcatgtgtgg gtgtgcatac tcctgatgtt cagagttcaa tgtgtgctac
     1261 cctgtttatt tctgcttgag gcaaggtctc catgaggcct agctggtcta actcctggtc
     1321 ttgcctcttg ttttcccctg agttttgaca ccataggctt gtcggcaaga tctggaaaag
     1381 gcttgatgtt cgtgtttgtt cgtgctgtgt aataaacaat tggttgacat attccaaaaa
     1441 aaaaaaaaaa aaaaaaaccc caaaaaaacc aaaaaaaaaa aaaaaa
//
